Gene detail

Detail information of MD08G1114100 Annotation

Gene ID	Annotation
MD08G1114100	Integrase-type DNA-binding superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0041

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD08G1114100	mRNA	Chr08	10245812	10246570	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Transcription Factors Family	ERF

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT5G11590.1	1	TINY2\|TINY2
Prunus persica	Prupe.1G448600.1.p	1	Integrase-type DNA-binding superfamily protein
Pyrus communis	PCP014610.1	1	-
Rosa multiflora	Rmu_sc0003594.1_g000007.1	1	-
Rubus occidentalis	Ro02_G00697	1	-
Fragaria vesca	mrna08838.1	1	Integrase-type DNA-binding superfamily protein
Populus trichocarpa	Potri.018G043900.1	1	Integrase-type DNA-binding superfamily protein
Nicotiana benthamiana	Niben101Scf05156g01011.1	1	Ethylene-responsive transcription factor 1
Nicotiana benthamiana	Niben101Scf01374g05001.1	1	Ethylene-responsive transcription factor 4
Nicotiana benthamiana	Niben101Scf01611g11002.1	0.89	Ethylene-responsive transcription factor 1
Zea mays	GRMZM2G005301_P01	1	-
Zea mays	GRMZM2G047918_P01	1	-

Gene Ontology

GO term	Description	Category
GO:0003700	transcription factor activity, sequence-specific DNA binding	molecular_function
GO:0003677	DNA binding	molecular_function

KEGG

KO	Description	Enzyme
K09286	EREBP-like factor	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00847.16	AP2	64	114	1.30E-12

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	10.2383
SRR5252888	dormant buds	no	dormant buds(0 month)	12.1886
SRR5252889	dormant buds	no	dormant buds(0 month)	15.218
SRR5252886	dormant buds	no	dormant buds(1 months)	7.56955
SRR5252887	dormant buds	no	dormant buds(1 months)	9.50766
SRR5252884	dormant buds	no	dormant buds(2 months)	3.21194
SRR5252882	dormant buds	no	dormant buds(3 months)	1.17142
SRR5252883	dormant buds	no	dormant buds(3 months)	2.71248
SRR5252880	dormant buds	no	dormant buds(4 months)	4.96861
SRR5252881	dormant buds	no	dormant buds(4 months)	4.05511
SRR5252878	bud break	no	bud break	0.873333
SRR5252879	bud break	no	bud break	2.25967
SRR3744766	flower	no	mature	2.40883
SRR3744767	flower	no	mature	2.40299
SRR3744768	flower	no	mature	2.46016
SRR6308190	stigmas	no	open flowers	0.452193
SRR6308181	styles	no	open flowers	1.16122
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.498034
SRR6308194	sepals	no	open flowers	0.482941
SRR6308193	receptacles	no	open flowers	0.384983
SRR6308189	ovaries	no	open flowers	0.780751
SRR3384922	fruit	no	1 week after full bloom	5.89651
SRR3384921	fruit	no	2 week after full bloom	2.22649
SRR3384920	fruit	no	3 week after full bloom	6.27348
SRR3384919	fruit	no	4 week after full bloom	9.17663
SRR3384923	fruit	no	5 week after full bloom	10.7938
SRR3384918	fruit	no	6 week after full bloom	11.6322
SRR3384917	fruit	no	8 week after full bloom	7.93561
SRR3384916	fruit	no	10 week after full bloom	6.23336
SRR3384915	fruit	no	12 week after full bloom	5.53143
SRR3384914	fruit	no	14 week after full bloom	3.1638
SRR3384913	fruit	no	16 week after full bloom	2.26826
SRR3384912	fruit	no	18 week after full bloom	1.52046
SRR3384911	fruit	no	19 week after full bloom	1.4583
SRR3384910	fruit	no	20 week after full bloom	0.114181
SRR768128	whole fruit	no	25 days post anthesis	3.44204
SRR768129	whole fruit	no	35 days post anthesis	7.37974
SRR768130	whole fruit	no	60 days post anthesis	13.8817
SRR768131	whole fruit	no	87 days post anthesis	5.45159
SRR7343308	immature fruit flesh	no	immature	3.2493
SRR7343309	immature fruit flesh	no	immature	3.2488
SRR6320494	ripe fruit flesh	no	mature	0.76395
SRR5405143	ripe fruit peel	no	mature	0.915592
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.15152
SRR7403506	fruit	uninfected	mature	0.320117
SRR7403507	fruit	uninfected	mature	0.285063
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	1.57733
SRR1613974	Central seeds	no	20DAPF	2.30626
SRR1613975	Central seeds	no	20DAPF	2.45207
SRR1613976	Lateral seeds	no	20DAPF	1.9642
SRR1613977	Lateral seeds	no	20DAPF	2.39432
SRR1613978	Lateral seeds	no	20DAPF	2.78437
SRR3744786	stem	no	mature	1.56587
SRR3744787	stem	no	mature	1.35814
SRR3744772	stem	no	mature	1.74146
SRX765691	seedling shoot apex	no	4-6 week old seedling	17.8606
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	7.91725
SRR1089478	leaf	Virus-free	plantlets	28.391
SRR1089477	leaf	ASGV-infected	plantlets	27.2757
SRR767660	leaf	uninfected	fully developed	56.1777
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	152.23
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	54.5263
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	40.9081
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	222.232
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	30.9668
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	32.2994
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	10.7671
SRR6308182	young leaf	no	immature leaves	5.16819
SRR3744769	leaf	no	mature	6.03129
SRR3744770	leaf	no	mature	4.87702
SRR3744771	leaf	no	mature	3.56802
SRR5405145	leaf	no	mature	17.7465
SRR6320561	leaf	no	mature	13.182