| Gene ID | Annotation |
|---|---|
| MD08G1233100 | senescence associated gene 18 |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0171 | floral organ senescence abscission MADS-box transcription enhancer factor 2A geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] RING finger protein 113A high mobility group protein B3 protein KTI12 |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD08G1233100 | mRNA | Chr08 | 29968324 | 29971956 | - |
| CDS: |
| MD08G1233100 |
| Protein: |
| MD08G1233100 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G71190.1 | 1 | SAG18|senescence associated gene 18 |
| Prunus persica | Prupe.1G571000.1.p | 1 | senescence associated gene 18 |
| Pyrus communis | PCP037263.1 | 1 | - |
| Pyrus x bretschneideri | Pbr026516.1 | 1 | - |
| Rosa multiflora | Rmu_sc0004325.1_g000004.1 | 1 | - |
| Rubus occidentalis | Ro05_G24626 | 1 | - |
| Fragaria vesca | mrna10880.1 | 1 | senescence associated gene 18 |
| Vitis vinifera | GSVIVT01022875001 | 1 | senescence associated gene 18 |
| Populus trichocarpa | Potri.001G211600.1 | 1 | senescence associated gene 18 |
| Nicotiana benthamiana | Niben101Scf02122g01008.1 | 1 | Alkaline phytoceramidase (aPHC) LENGTH=270 |
| Oryza sativa | LOC_Os01g73120.1 | 1 | expressed protein |
| Zea mays | GRMZM2G147709_P01 | 1 | Membrane protein |
| GO term | Description | Category |
|---|---|---|
| GO:0016021 | integral component of membrane | cellular component |
| GO:0006672 | ceramide metabolic process | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |