Gene detail

Detail information of MD08G1237800 Annotation

Gene ID	Annotation
MD08G1237800	serine carboxypeptidase-like 45

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD08G1237800	mRNA	Chr08	30494653	30497898	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.7G030500.1.p	1	serine carboxypeptidase-like 45
Populus trichocarpa	Potri.006G036500.1	1	serine carboxypeptidase-like 45

Gene Ontology

GO term	Description	Category
GO:0004185	serine-type carboxypeptidase activity	molecular_function
GO:0006508	proteolysis	biological_process

KEGG

KO	Description	Enzyme
K16297	serine carboxypeptidase-like clade II	EC:3.4.16.-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00450.18	Peptidase_S10	39	452	3.70E-126

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	33.7214
SRR5252888	dormant buds	no	dormant buds(0 month)	2.01805
SRR5252889	dormant buds	no	dormant buds(0 month)	1.01904
SRR5252886	dormant buds	no	dormant buds(1 months)	2.89219
SRR5252887	dormant buds	no	dormant buds(1 months)	1.60678
SRR5252884	dormant buds	no	dormant buds(2 months)	2.56602
SRR5252882	dormant buds	no	dormant buds(3 months)	2.90927
SRR5252883	dormant buds	no	dormant buds(3 months)	4.14557
SRR5252880	dormant buds	no	dormant buds(4 months)	2.68013
SRR5252881	dormant buds	no	dormant buds(4 months)	1.54939
SRR5252878	bud break	no	bud break	0.7786
SRR5252879	bud break	no	bud break	1.35674
SRR3744766	flower	no	mature	0.234093
SRR3744767	flower	no	mature	0.594073
SRR3744768	flower	no	mature	0.514769
SRR6308190	stigmas	no	open flowers	0.266542
SRR6308181	styles	no	open flowers	0.534853
SRR6308188	filaments	no	open flowers	0.229514
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.11838
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	1.86339
SRR6308194	sepals	no	open flowers	9.59998
SRR6308193	receptacles	no	open flowers	0.454813
SRR6308189	ovaries	no	open flowers	0.616022
SRR3384922	fruit	no	1 week after full bloom	1.62369
SRR3384921	fruit	no	2 week after full bloom	0.340169
SRR3384920	fruit	no	3 week after full bloom	0.299525
SRR3384919	fruit	no	4 week after full bloom	0.092239
SRR3384923	fruit	no	5 week after full bloom	0.307015
SRR3384918	fruit	no	6 week after full bloom	0
SRR3384917	fruit	no	8 week after full bloom	0
SRR3384916	fruit	no	10 week after full bloom	0.320503
SRR3384915	fruit	no	12 week after full bloom	0.216694
SRR3384914	fruit	no	14 week after full bloom	0.78811
SRR3384913	fruit	no	16 week after full bloom	0.680725
SRR3384912	fruit	no	18 week after full bloom	0.34845
SRR3384911	fruit	no	19 week after full bloom	0.389905
SRR3384910	fruit	no	20 week after full bloom	1.04669
SRR768128	whole fruit	no	25 days post anthesis	1.07174
SRR768129	whole fruit	no	35 days post anthesis	0.207694
SRR768130	whole fruit	no	60 days post anthesis	0
SRR768131	whole fruit	no	87 days post anthesis	0.174738
SRR7343308	immature fruit flesh	no	immature	0.309428
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.378072
SRR7403506	fruit	uninfected	mature	0.399378
SRR7403507	fruit	uninfected	mature	0.364764
SRR7403500	fruit	infected with penicillium expansum	mature	0.676486
SRR7403501	fruit	infected with penicillium expansum	mature	0.446173
SRR7403508	fruit	infected with penicillium expansum	mature	0.643286
SRR7403502	fruit	infected with penicillium expansum	mature	1.36772
SRR7403503	fruit	infected with penicillium expansum	mature	1.66651
SRR7403505	fruit	infected with penicillium expansum	mature	1.31074
SRR1613973	Central seeds	no	20DAPF	0.171947
SRR1613974	Central seeds	no	20DAPF	0.193307
SRR1613975	Central seeds	no	20DAPF	0.174963
SRR1613976	Lateral seeds	no	20DAPF	0.115024
SRR1613977	Lateral seeds	no	20DAPF	0.124572
SRR1613978	Lateral seeds	no	20DAPF	0.149843
SRR3744786	stem	no	mature	0.698462
SRR3744787	stem	no	mature	0.595699
SRR3744772	stem	no	mature	0.879324
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.30525
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.02219
SRR1089478	leaf	Virus-free	plantlets	0.402736
SRR1089477	leaf	ASGV-infected	plantlets	0.468598
SRR767660	leaf	uninfected	fully developed	31.8641
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	8.0409
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	17.2836
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	25.0668
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	19.1838
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	15.6802
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	21.4747
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	23.1786
SRR6308182	young leaf	no	immature leaves	2.03719
SRR3744769	leaf	no	mature	3.66767
SRR3744770	leaf	no	mature	2.97944
SRR3744771	leaf	no	mature	3.6486
SRR5405145	leaf	no	mature	43.5566
SRR6320561	leaf	no	mature	43.1452