Gene detail

Detail information of MD08G1250800 Annotation

Gene ID	Annotation
MD08G1250800	ferric reduction oxidase 7

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD08G1250800	mRNA	Chr08	31575419	31580012	+

Sequences

CDS:

MD08G1250800

GATGCTTCCCACCTCTCTCTTCCTCCCCCCCCCCCTCTCTCCTCCTCTCTCTCTCTCTCTCTCTGCAATGTGTTCAATGTTGTGAATCCCATATATATATTGGCAGGCCTATGGCCTTCTGGGTTCGCTCAGTGGACAGACTGAGGTTGCTGGAAAGCTTTAGTTGGAGCATTAAGCAAGTTTGAGAAAGAAATAAATTAATTTGGGCCATGGATAATAAGCAACCCCTTCTTCTGAGCCAAGGATCGGGAGGACATGTTAATTATTATGTCAATCTTAGGAAGACATCTCTTTCTGTAACCTTTGCAAAATGGATCCTCAAGATTGCCATGTGGGTGCTTTTCATTTCATGGGTTGCTCTAATGTTTCTGTTCCCATCAGATTTCATGCAGAAATTATTTAACAAATCGATCCAAGCCACTCAGGGAACTGTTTTTGGGATCACAGGAAGCCTATTCCTGGTTTTCAGTAGCCCAATTCTCACTATTGCACTGCTTTCTATAGCATTTCTTATTATCTCTGGCGAAGAGCAGCTCCACGAGAACAAGACTTCAAAATGTCCGAGTTTCCGCTTATGGACGTTCCCAGTTCTTGTGGATGGACCATTTGGGGTTGTTTCTGCTGCCGAGTTTATCGGGATATTACTCTTTGTTGTGTATGTTTTCTGGGCTGTCTACAGTTATATCACGAGTATTCTCAGCTCCATGTCTGATCAGTTAACTTTCAAAGTGAAAAGTTGTTTGTTCCTGGAAATATTGGGACTTCGTTTAGGCTCAATCGGGATGTTTTGCCTGGCACTTTTGTTCCTACCGGTTGCAAGGGGATCAGTTCTTCTTCGACTTATAAATATACCTTTTGAGCACGCTACAAGATATCATGTATGGCTGGGACATCTCACAATGATGCTCTTTACCATCCATGGACTGTGTTATGTAGTGGCATGGACAGTTGAGGGCCGTCTCCTCCATGAAATGTTGGATTGGAAGGATATTGGTGTTGCCAATCTTCCAGGATTGATCAGCCTTATCGCAGGTCTGTTGATGTGGGTCACATCACTTCCTCCAGTAAGAAAGCTGAATTTTGAGTTGTTCTTCTACACTCATCAACTATATGTCATCTTCGTTGTCTTCTTGGCTTTGCACGTTGGTGATTTCATTTTCACAATGGCTGCTGGAGGAATATTCATTTTTATTCTTGATCGTTTTCTGAGATTCTGCCAATCACGAAGGGTTGTGGATATCATTTCAGCGAAATGCCTTCCATGTGGAACTGTAGAATTGGTCCTCGCAAAACCAAAATGTCTGCGGTACAATGCCCTCAGTTTTATTTTTCTTCAAGTTCGGGAATTATCATGGTTGCAGTGGCATCCTTTCAGTGTTTCATCCAGTCCTTTGGATGGTAAATATCATATTGCCGTCCTCATAAAGGTTCTAGGGAAATGGACAGAAAAACTGAGAGGAAATATCTTGGAAAACTCAGAGGTAGAACACCAAAAGGAGCTACCCTGGACTCCTCGTGCTAAGATAACAGCTTCTGTTGAGGGGCCTTATGGGCATGAGATACCGTACCACTTGATGTATGGAAATCTTATCTTAGTAGCTGGTGGCATTGGGATTTCACCTTTCCTGGCCGTCTTGAGTGACATTCTCCATTGCGTTAGGGAAGGGAGACCTTGTACACCAAGAAATATTTTAATTGTTTGGGCTGTCAAAAGATCAGATGAGCTTCCACTTCTTTCAACAATTGACATGGAGTCAATTTGTCCATCTTTCTCTAATAAACTAAATATTGAGATTCGTATTTATGTCACTCGAGAATCTGAACCTCCATTGGAAGAAGGTAAAGTTCAGAACACTCTGGATTTTTCTCTTTGTCCTACATCGAATAGGTGCGGCATGTCTGTTTTGGTTGGTACTGGACATAATGTATGGTCTGGACTGTATATAATCTCATCTACGGTTGGCTTTGTTATCTTAATGGGTTTATTGGATATCTTCTACATAAACCCGTTTCGCATATCTTCATGGTGGTACAAAGGGCTTCTTTTCATAGCCTGTATGGTGTTTAGTGTCTTTATCTTTGGGGGTCTTGTGGTTGGTTTATGGCATCTTTGGGAAAGAAGAATTTCGGAAAAAGAACAATTTGAGGATGCTAAGCTAAATGCAGATAAGGCAGGGCATGGAGAAACTGTAGCTCACAAGGATTCGCACCAGAAAGTTCTTGCGAAGCTAACCGGCATTCGTTATGGTGCGAGACCAAACTTCAAAGAAATATTTGAAAGCGTATCCAAGAATTGGGGCCATGTTGATGTGGGTGTCATTGTGTGTGGTCCTCCAACTCTTCAATCAAGTGTTGCGAAGGAGATCAGGTCGCACAACTTGAGGAGACAGTTCGACCATCCTATCTTCCATTTCAACAGCCATAGTTTTGATCTGTAGCCTCCCACTCCACAACATGTTTATTTATATGATTGTACACAAATATGTATATAGATATAGACTAGAGCTTTAGTACCCGCGCATTGCCGCGGGAATATCATATGAATTATAAGTTGTATAAAAGTGTTAGAATAAGAAATTAAATGAGTTGTAAGCATAATCGTAGATATGTCAAAAAAACTATTTACATAAAATATGAAAAGTATAAAATATGTTGTAGTTGTTGACAACTCTATATACACCTATAGAGTTGTTCAAAATATGACAGCTTGTACAAACATGAGTTTTTGAAATTTACCTGCTT

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT5G49740.1	1	ATFRO7;FRO7\|FERRIC REDUCTION OXIDASE 7
Arabidopsis thaliana	AT5G49730.1	0.774	ATFRO6;FRO6;FRO6\|ferric reduction oxidase 6;
Prunus persica	Prupe.1G587800.1.p	1	ferric reduction oxidase 7
Pyrus communis	PCP040854.1	1	-
Pyrus x bretschneideri	Pbr026641.1	1	-
Rosa multiflora	Rmu_sc0003627.1_g000006.1	1	-
Rubus occidentalis	Ro05_G31128	1	-
Fragaria vesca	mrna29280.1	1	ferric reduction oxidase 7
Vitis vinifera	GSVIVT01023105001	1	ferric reduction oxidase 7
Solanum lycopersicum	Solyc01g102610.2.1	1	ferric reduction oxidase 7
Populus trichocarpa	Potri.001G079000.1	1	ferric reduction oxidase 6
Nicotiana benthamiana	Niben101Scf17179g00002.1	1	Ferric reduction oxidase 6
Oryza sativa	LOC_Os04g36720.1	1	"ferric-chelate reductase, putative, expressed"
Zea mays	GRMZM2G068557_P01	1	-

Gene Ontology

GO term	Description	Category
GO:0055114	oxidation-reduction process	biological_process
GO:0016491	oxidoreductase activity	molecular_function

KEGG

KO	Description	Enzyme
K00521	ferric-chelate reductase	EC:1.16.1.7

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF08022.8	FAD_binding_8	344	449	1.80E-17
PF08030.8	NAD_binding_6	457	717	3.40E-19

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	7.24649
SRR5252888	dormant buds	no	dormant buds(0 month)	9.9817
SRR5252889	dormant buds	no	dormant buds(0 month)	11.1575
SRR5252886	dormant buds	no	dormant buds(1 months)	8.67562
SRR5252887	dormant buds	no	dormant buds(1 months)	8.03837
SRR5252884	dormant buds	no	dormant buds(2 months)	5.78936
SRR5252882	dormant buds	no	dormant buds(3 months)	12.244
SRR5252883	dormant buds	no	dormant buds(3 months)	12.0696
SRR5252880	dormant buds	no	dormant buds(4 months)	15.5579
SRR5252881	dormant buds	no	dormant buds(4 months)	13.3185
SRR5252878	bud break	no	bud break	16.6254
SRR5252879	bud break	no	bud break	6.67862
SRR3744766	flower	no	mature	4.59307
SRR3744767	flower	no	mature	4.06888
SRR3744768	flower	no	mature	4.048
SRR6308190	stigmas	no	open flowers	12.0193
SRR6308181	styles	no	open flowers	7.61024
SRR6308188	filaments	no	open flowers	5.86489
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	3.36845
SRR6308192	pollen	no	open flowers	3.82132
SRR6308191	petals	no	open flowers	4.51818
SRR6308194	sepals	no	open flowers	10.9185
SRR6308193	receptacles	no	open flowers	6.29432
SRR6308189	ovaries	no	open flowers	9.00871
SRR3384922	fruit	no	1 week after full bloom	5.52401
SRR3384921	fruit	no	2 week after full bloom	9.36879
SRR3384920	fruit	no	3 week after full bloom	10.8115
SRR3384919	fruit	no	4 week after full bloom	14.4361
SRR3384923	fruit	no	5 week after full bloom	11.8486
SRR3384918	fruit	no	6 week after full bloom	20.2669
SRR3384917	fruit	no	8 week after full bloom	29.1806
SRR3384916	fruit	no	10 week after full bloom	27.2432
SRR3384915	fruit	no	12 week after full bloom	15.2156
SRR3384914	fruit	no	14 week after full bloom	27.1433
SRR3384913	fruit	no	16 week after full bloom	18.7424
SRR3384912	fruit	no	18 week after full bloom	19.5868
SRR3384911	fruit	no	19 week after full bloom	16.8069
SRR3384910	fruit	no	20 week after full bloom	9.74035
SRR768128	whole fruit	no	25 days post anthesis	9.54701
SRR768129	whole fruit	no	35 days post anthesis	11.775
SRR768130	whole fruit	no	60 days post anthesis	21.4471
SRR768131	whole fruit	no	87 days post anthesis	25.1778
SRR7343308	immature fruit flesh	no	immature	11.5095
SRR7343309	immature fruit flesh	no	immature	13.2181
SRR6320494	ripe fruit flesh	no	mature	6.36901
SRR5405143	ripe fruit peel	no	mature	5.63146
SRR6320572	ripe fruit peel	no	mature	3.94552
SRR7403504	fruit	uninfected	mature	2.93998
SRR7403506	fruit	uninfected	mature	3.81702
SRR7403507	fruit	uninfected	mature	3.37844
SRR7403500	fruit	infected with penicillium expansum	mature	0.297149
SRR7403501	fruit	infected with penicillium expansum	mature	0.251979
SRR7403508	fruit	infected with penicillium expansum	mature	0.635773
SRR7403502	fruit	infected with penicillium expansum	mature	0.456435
SRR7403503	fruit	infected with penicillium expansum	mature	0.509801
SRR7403505	fruit	infected with penicillium expansum	mature	0.6345
SRR1613973	Central seeds	no	20DAPF	3.57313
SRR1613974	Central seeds	no	20DAPF	3.65185
SRR1613975	Central seeds	no	20DAPF	2.82958
SRR1613976	Lateral seeds	no	20DAPF	3.18895
SRR1613977	Lateral seeds	no	20DAPF	2.94519
SRR1613978	Lateral seeds	no	20DAPF	3.19088
SRR3744786	stem	no	mature	3.04241
SRR3744787	stem	no	mature	3.34125
SRR3744772	stem	no	mature	3.35912
SRX765691	seedling shoot apex	no	4-6 week old seedling	3.47312
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.16905
SRR1089478	leaf	Virus-free	plantlets	9.79875
SRR1089477	leaf	ASGV-infected	plantlets	16.5273
SRR767660	leaf	uninfected	fully developed	72.8459
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	21.2393
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	67.1249
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	14.9347
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	22.5091
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	23.449
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	34.0543
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	23.9537
SRR6308182	young leaf	no	immature leaves	3.65792
SRR3744769	leaf	no	mature	8.2267
SRR3744770	leaf	no	mature	9.51128
SRR3744771	leaf	no	mature	9.71015
SRR5405145	leaf	no	mature	25.205
SRR6320561	leaf	no	mature	28.3712