Gene detail

Detail information of MD09G1011400 Annotation

Gene ID	Annotation
MD09G1011400	cytochrome P450

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD09G1011400	mRNA	Chr09	753957	755501	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Cytochrome P450 Family	CYP94B

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.3G305600.1.p	1	"cytochrome P450, family 94, subfamily B, polypeptide 3"
Pyrus communis	PCP030799.1	1	-
Rosa multiflora	Rmu_sc0021955.1_g000002.1	1	-
Rubus occidentalis	Ro06_G03808	1	-
Fragaria vesca	mrna25884.1	1	"cytochrome P450, family 94, subfamily B, polypeptide 2"
Vitis vinifera	GSVIVT01033100001	1	"cytochrome P450, family 94, subfamily B, polypeptide 3"
Populus trichocarpa	Potri.001G331100.1	1	"cytochrome P450, family 94, subfamily B, polypeptide 2"
Zea mays	GRMZM2G177668_P01	1	Putative cytochrome P450 superfamily protein
Zea mays	GRMZM2G164074_P01	0.732	Cytochrome P450 CYP94B12;

Gene Ontology

GO term	Description	Category
GO:0020037	heme binding	molecular_function
GO:0055114	oxidation-reduction process	biological_process
GO:0004497	monooxygenase activity	molecular_function
GO:0005506	iron ion binding	molecular_function
GO:0009055	electron carrier activity	molecular_function

KEGG

KO	Description	Enzyme
K20665	jasmonoyl-isoleucine 12-hydroxylase	EC:1.14.-.-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.18	p450	43	486	2.80E-63

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.109995
SRR5252888	dormant buds	no	dormant buds(0 month)	0.166317
SRR5252889	dormant buds	no	dormant buds(0 month)	0.513784
SRR5252886	dormant buds	no	dormant buds(1 months)	0.845089
SRR5252887	dormant buds	no	dormant buds(1 months)	0.299388
SRR5252884	dormant buds	no	dormant buds(2 months)	0.597653
SRR5252882	dormant buds	no	dormant buds(3 months)	0.359648
SRR5252883	dormant buds	no	dormant buds(3 months)	0.0653163
SRR5252880	dormant buds	no	dormant buds(4 months)	0.478576
SRR5252881	dormant buds	no	dormant buds(4 months)	0.995998
SRR5252878	bud break	no	bud break	0.476675
SRR5252879	bud break	no	bud break	2.11433
SRR3744766	flower	no	mature	1.58241
SRR3744767	flower	no	mature	1.05538
SRR3744768	flower	no	mature	1.72516
SRR6308190	stigmas	no	open flowers	0.0950704
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.209864
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	0.0659052
SRR3384922	fruit	no	1 week after full bloom	2.07633
SRR3384921	fruit	no	2 week after full bloom	4.98094
SRR3384920	fruit	no	3 week after full bloom	0.374398
SRR3384919	fruit	no	4 week after full bloom	0.296476
SRR3384923	fruit	no	5 week after full bloom	0.0939819
SRR3384918	fruit	no	6 week after full bloom	0.0523106
SRR3384917	fruit	no	8 week after full bloom	0
SRR3384916	fruit	no	10 week after full bloom	0.0490554
SRR3384915	fruit	no	12 week after full bloom	0
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0.0663028
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	0.059678
SRR3384910	fruit	no	20 week after full bloom	0
SRR768128	whole fruit	no	25 days post anthesis	0.270097
SRR768129	whole fruit	no	35 days post anthesis	0.148303
SRR768130	whole fruit	no	60 days post anthesis	0.248644
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0.994688
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0.148759
SRR7403505	fruit	infected with penicillium expansum	mature	0.0668583
SRR1613973	Central seeds	no	20DAPF	0
SRR1613974	Central seeds	no	20DAPF	0.0690003
SRR1613975	Central seeds	no	20DAPF	0.0312262
SRR1613976	Lateral seeds	no	20DAPF	0.0246344
SRR1613977	Lateral seeds	no	20DAPF	0.0476419
SRR1613978	Lateral seeds	no	20DAPF	0.0145872
SRR3744786	stem	no	mature	0.129214
SRR3744787	stem	no	mature	0.0767078
SRR3744772	stem	no	mature	0.127511
SRX765691	seedling shoot apex	no	4-6 week old seedling	8.95439
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.59082
SRR1089478	leaf	Virus-free	plantlets	3.01885
SRR1089477	leaf	ASGV-infected	plantlets	1.00358
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	7.56975
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.553253
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.16533
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.139434
SRR6308182	young leaf	no	immature leaves	0.476781
SRR3744769	leaf	no	mature	0.10562
SRR3744770	leaf	no	mature	0.11123
SRR3744771	leaf	no	mature	0.0547822
SRR5405145	leaf	no	mature	0.192003
SRR6320561	leaf	no	mature	0.282453