| Gene ID | Annotation |
|---|---|
| MD09G1015500 | Rubisco methyltransferase family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0374 | magnesium chelatase subunit H [EC:6.6.1.1] chloroplast inner membrane chlorophyll biosynthetic process thylakoid membrane organization rRNA processing chloroplast stroma amyloplast magnesium chelatase complex photosynthesis chloroplast thylakoid membrane plastid chromosome chloroplast relocation carotenoid biosynthetic process stomatal complex morphogenesis magnesium chelatase activity pentose-phosphate shunt photosystem II stabilization |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD09G1015500 | mRNA | Chr09 | 955839 | 959683 | - |
| CDS: |
| MD09G1015500 |
| Protein: |
| MD09G1015500 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT5G14260.1 | 1 | Rubisco methyltransferase family protein |
| Arabidopsis thaliana | AT5G14260.2 | 1 | Rubisco methyltransferase family protein |
| Arabidopsis thaliana | AT5G14260.3 | 1 | Rubisco methyltransferase family protein |
| Prunus persica | Prupe.3G302300.1.p | 1 | Rubisco methyltransferase family protein |
| Pyrus communis | PCP000255.1 | 1 | - |
| Pyrus x bretschneideri | Pbr014452.2 | 1 | - |
| Rosa multiflora | Rmu_sc0021139.1_g000001.1 | 1 | - |
| Rosa multiflora | Rmu_sc0021138.1_g000001.1 | 1 | - |
| Rubus occidentalis | Ro06_G28058 | 1 | - |
| Fragaria vesca | mrna26385.1 | 1 | Rubisco methyltransferase family protein |
| Vitis vinifera | GSVIVT01001828001 | 1 | Rubisco methyltransferase family protein |
| Solanum lycopersicum | Solyc02g068050.2.1 | 1 | Rubisco methyltransferase family protein |
| Populus trichocarpa | Potri.017G066500.1 | 1 | Rubisco methyltransferase family protein |
| Nicotiana benthamiana | Niben101Scf01761g05001.1 | 1 | Histone-lysine N-methyltransferase setd3 |
| Nicotiana benthamiana | Niben101Scf03766g03001.1 | 0.75 | Histone-lysine N-methyltransferase setd3 |
| Oryza sativa | LOC_Os12g13460.1 | 1 | "SET domain-containing protein, putative, expressed" |
| Zea mays | GRMZM2G047695_P01 | 1 | - |
| GO term | Description | Category |
|---|---|---|
| -- | -- | -- |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF09273.7 | Rubis-subs-bind | 364 | 485 | 3.10E-18 |
 |