Gene detail

Detail information of MD09G1058700 Annotation

Gene ID	Annotation
MD09G1058700	Outward rectifying potassium channel protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD09G1058700	mRNA	Chr09	3894527	3895828	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
--	--	--	--

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07885.12	Ion_trans_2	43	108	1.20E-06
PF07885.12	Ion_trans_2	161	226	9.20E-12

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	1.51869
SRR5252888	dormant buds	no	dormant buds(0 month)	1.09975
SRR5252889	dormant buds	no	dormant buds(0 month)	0.990889
SRR5252886	dormant buds	no	dormant buds(1 months)	1.24179
SRR5252887	dormant buds	no	dormant buds(1 months)	0.989833
SRR5252884	dormant buds	no	dormant buds(2 months)	1.05384
SRR5252882	dormant buds	no	dormant buds(3 months)	1.32118
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	1.84597
SRR5252881	dormant buds	no	dormant buds(4 months)	2.19531
SRR5252878	bud break	no	bud break	1.31332
SRR5252879	bud break	no	bud break	1.16506
SRR3744766	flower	no	mature	0.455072
SRR3744767	flower	no	mature	0.500873
SRR3744768	flower	no	mature	0.408989
SRR6308190	stigmas	no	open flowers	0
SRR6308181	styles	no	open flowers	0.175517
SRR6308188	filaments	no	open flowers	0.530848
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.272009
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.225749
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	0.424788
SRR3384922	fruit	no	1 week after full bloom	0.98977
SRR3384921	fruit	no	2 week after full bloom	0.401762
SRR3384920	fruit	no	3 week after full bloom	0.707516
SRR3384919	fruit	no	4 week after full bloom	1.6341
SRR3384923	fruit	no	5 week after full bloom	1.13961
SRR3384918	fruit	no	6 week after full bloom	0.691977
SRR3384917	fruit	no	8 week after full bloom	1.16554
SRR3384916	fruit	no	10 week after full bloom	0.973373
SRR3384915	fruit	no	12 week after full bloom	0.76779
SRR3384914	fruit	no	14 week after full bloom	0.496431
SRR3384913	fruit	no	16 week after full bloom	1.02325
SRR3384912	fruit	no	18 week after full bloom	1.37181
SRR3384911	fruit	no	19 week after full bloom	1.31572
SRR3384910	fruit	no	20 week after full bloom	1.23621
SRR768128	whole fruit	no	25 days post anthesis	0.444134
SRR768129	whole fruit	no	35 days post anthesis	2.27605
SRR768130	whole fruit	no	60 days post anthesis	0.545144
SRR768131	whole fruit	no	87 days post anthesis	1.231
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	2.19674
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	1.64893
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.957699
SRR7403506	fruit	uninfected	mature	0.939407
SRR7403507	fruit	uninfected	mature	0.85799
SRR7403500	fruit	infected with penicillium expansum	mature	0.530404
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0.37828
SRR7403502	fruit	infected with penicillium expansum	mature	0.584931
SRR7403503	fruit	infected with penicillium expansum	mature	0.489991
SRR7403505	fruit	infected with penicillium expansum	mature	0.293629
SRR1613973	Central seeds	no	20DAPF	6.54389
SRR1613974	Central seeds	no	20DAPF	5.14883
SRR1613975	Central seeds	no	20DAPF	5.86507
SRR1613976	Lateral seeds	no	20DAPF	4.03515
SRR1613977	Lateral seeds	no	20DAPF	4.66146
SRR1613978	Lateral seeds	no	20DAPF	3.75931
SRR3744786	stem	no	mature	0.468354
SRR3744787	stem	no	mature	0.754176
SRR3744772	stem	no	mature	0.347145
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.523313
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.679398
SRR1089478	leaf	Virus-free	plantlets	0.235445
SRR1089477	leaf	ASGV-infected	plantlets	0.547896
SRR767660	leaf	uninfected	fully developed	0.715417
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	13.2905
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.1927
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	1.07059
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.608409
SRR6308182	young leaf	no	immature leaves	0.585735
SRR3744769	leaf	no	mature	0.297651
SRR3744770	leaf	no	mature	0.253399
SRR3744771	leaf	no	mature	0.751826
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0.917991