Gene detail

Detail information of MD09G1070300 Annotation

Gene ID	Annotation
MD09G1070300	aminopeptidase M1

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0313	phosphatidylinositol phospholipase C activity S-adenosylmethionine-dependent methyltransferase activity metallopeptidase activity aminopeptidase activity

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD09G1070300	mRNA	Chr09	4853891	4857553	-

Sequences

CDS:

MD09G1070300

ATGTTTAAGTTCTGCAGATACTTTGCTGTGCCATACCCGTTGCCCAAATTGGATATGGTTGCAATACCTGATTTTTCTTTCGCCGGCATGGAGAATTATGGTTTAGTTACATACCGAGAAATGGCTTTGCTTTTTGATGAAACAACATTCTGCAGTGCCAACAAGCAAAGGGTTACGATTACCGTGGCACATGAATTGGCACACCAGTGGTTTGGCAATCTTGTAACAAAGGAATGGTGGACGCATTTATGGCTGAATGAGGGATTTGCAACATGGGTATCACTTCATATCATTGTTATACTTGTGAGCTATTTAGCTACTGATAGCTTATTCCCAGAGTGGAAAATATGGACTCAGTTTCTTAATGAAGTCACTGCTGGTCTTAAGCTGGATGGGCTTGAAGAATCTCACCCCATTGAGAGGTCAATTGCTTCATATATCAAAAAGCATGCTTACTCAAATGCAAAGACAGAAGATTTGTGGGCTGCCCTTGAGGAGGGATCCGGTGAACCTGTAAACAAACTAATGAATTCATGGACACAGCAGAAGGGTTACCCGGTCATTTCTGTCAAAGTCAAAGATCAAAAGTTGGAGTTTAATCAGACACAATTCTACTCAAGCGGTTCCCAAGGCGATGGGCAATGGATTGTGCCGATTACATTATCCTGTGGCTCGTATGATGTGCGCAAGAATTTCCTACTACAAGCGAAGTCTGAAACTCTTGACATAAAGGAATTTCTGGGTTGCTCAGTAGGAAAGGCTGGATGTGGAGGCACAAGCAACAAAGACAATGCTTTATGCAGTTGGATAAAAGTCAATGTGGATCAGACTGGTTTTTACAGAGTGAAATATGAGGATGAACTTGCAGCTGCGCTTAGAAACGCTATCGAAGAGAAGCAATTGTCTGAAACTGACAGATTTGGCATTTTGGATGATTCCTTTGCCCTATCAATGGCTCGCAAGCAGTCTTTTGCTTCATTGCTTACCTTGTTGAGTGCATACAGAGAGGAACTTGAGTATATCGTGCTGTCAAATTTGATTGCTATAAGTTATAATCTGGCAAGAATTGCAGCCGATGCTGTACCCGGACTACTGGATCACATTAAACAATTCTTTATTGGACTTTTCCAGTATTCTGCAGAGAGGCTTGGTTGGCAGCCTAAACCGGGCGAAAGCCATTTAGATGCAATGTTGAGAGGAGAAATTTTGACTGCACTTGCTGTTTTTGGTCATGAACTGACGTTAGATGAAGCAAGTAGGCGTTTTCATGCCTTTATAGAAGACAGAAACACGCCCCTCCTTCCCCCAGACATTAGAAAGGCAGCATATGTGGCTGTAATGCAAAGAACAAGTGTATCTGACCGATCAGGCTATGAATCTCTTGTTAGAGTCTACAGAGAGAGTGATCTAAGCCAGGAGAAAACCCGCATTCTAGGTTCTTTAGCGTCTTGTCCCGATCCCAATATTACACTGGAAGTTCTCCACTTTATATTGACTCCTGAGGTTCGCAGTCAGGATGCTGTATTTGGACTCGCTGTTAGTAATGAAGGTCGGGAAACAGCATGGAAGTGGATGAAGGATAACTGGGAGCACATCTCAAAGACCTGGGGGTCTGGATTACTAATTCCTCGCTTTGTCAATGAAATTGTTTCACCGTTTGCTTCATTTGACAAGGTTAAGGAAGTAGATGAGTTCTTCAAAGCACATCCAAACCCGAAGATAACTAGAACAGTGAAGCAGAGCATTGAGCGGGTGCAAATCAACGCCAAATGGGTTCAGAGTGTTCAGAGCGAGAGAAACCTTGCCGATGTCGCGACGGAGTTGGCATACCGGAAATACTAGGATGCCATGTTTGGCTGCGTCTGTTTTTTAACAAGATTATGGGCTGGTTTGGTATCGTTTATTTAAAAAAAAAAAAAACTGTTTCTGCTGTACTGTGATAATAAGTTGAAATAAAGCAGCAGAGAGTTTGTTAAACTTTTTTGTAGCAGTGCTTTTGAAAAAAAAAAACAGTATTATAATGTGTGATAAACTTTTATGTAAAATAGCTGTAATTGTGTGAAATGGCTAAAAATGGTATAATATTAGATGTGCCTTAA

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
--	--	--	--

Gene Ontology

GO term	Description	Category
GO:0006508	proteolysis	biological_process
GO:0008237	metallopeptidase activity	molecular_function
GO:0008270	zinc ion binding	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11838.4	ERAP1_C	269	585	5.60E-69

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.174646
SRR5252888	dormant buds	no	dormant buds(0 month)	0.11743
SRR5252889	dormant buds	no	dormant buds(0 month)	0.226727
SRR5252886	dormant buds	no	dormant buds(1 months)	0.0994477
SRR5252887	dormant buds	no	dormant buds(1 months)	0.264233
SRR5252884	dormant buds	no	dormant buds(2 months)	0.337585
SRR5252882	dormant buds	no	dormant buds(3 months)	0.16929
SRR5252883	dormant buds	no	dormant buds(3 months)	0.18447
SRR5252880	dormant buds	no	dormant buds(4 months)	0.168952
SRR5252881	dormant buds	no	dormant buds(4 months)	0.234412
SRR5252878	bud break	no	bud break	0.168281
SRR5252879	bud break	no	bud break	0.233257
SRR3744766	flower	no	mature	0.422869
SRR3744767	flower	no	mature	0.354252
SRR3744768	flower	no	mature	0.308825
SRR6308190	stigmas	no	open flowers	0.404997
SRR6308181	styles	no	open flowers	0.174273
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0.115216
SRR6308189	ovaries	no	open flowers	0.140488
SRR3384922	fruit	no	1 week after full bloom	0.0792391
SRR3384921	fruit	no	2 week after full bloom	0.471743
SRR3384920	fruit	no	3 week after full bloom	0.302093
SRR3384919	fruit	no	4 week after full bloom	0.697723
SRR3384923	fruit	no	5 week after full bloom	0.298588
SRR3384918	fruit	no	6 week after full bloom	0.553984
SRR3384917	fruit	no	8 week after full bloom	0.533206
SRR3384916	fruit	no	10 week after full bloom	0.935117
SRR3384915	fruit	no	12 week after full bloom	0.942506
SRR3384914	fruit	no	14 week after full bloom	0.635893
SRR3384913	fruit	no	16 week after full bloom	1.17027
SRR3384912	fruit	no	18 week after full bloom	0.746805
SRR3384911	fruit	no	19 week after full bloom	0.33707
SRR3384910	fruit	no	20 week after full bloom	0.230927
SRR768128	whole fruit	no	25 days post anthesis	0
SRR768129	whole fruit	no	35 days post anthesis	0.104848
SRR768130	whole fruit	no	60 days post anthesis	0
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0.466795
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.572403
SRR7403506	fruit	uninfected	mature	0.395355
SRR7403507	fruit	uninfected	mature	0.220902
SRR7403500	fruit	infected with penicillium expansum	mature	0.0569002
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0.182613
SRR7403502	fruit	infected with penicillium expansum	mature	0.0941245
SRR7403503	fruit	infected with penicillium expansum	mature	0.210259
SRR7403505	fruit	infected with penicillium expansum	mature	0.141748
SRR1613973	Central seeds	no	20DAPF	0.106608
SRR1613974	Central seeds	no	20DAPF	0.0244141
SRR1613975	Central seeds	no	20DAPF	0.0552434
SRR1613976	Lateral seeds	no	20DAPF	0.0348653
SRR1613977	Lateral seeds	no	20DAPF	0.0269712
SRR1613978	Lateral seeds	no	20DAPF	0.0722586
SRR3744786	stem	no	mature	4.74928
SRR3744787	stem	no	mature	4.85866
SRR3744772	stem	no	mature	3.82672
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.149652
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.199548
SRR1089478	leaf	Virus-free	plantlets	0
SRR1089477	leaf	ASGV-infected	plantlets	0.059184
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0
SRR6308182	young leaf	no	immature leaves	0.241945
SRR3744769	leaf	no	mature	0.723158
SRR3744770	leaf	no	mature	0.564903
SRR3744771	leaf	no	mature	0.766786
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0.200274