Detail information of MD09G1075600 Annotation
Gene IDAnnotation
MD09G1075600auxin transport protein (BIG)

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD09G1075600mRNAChr0953265385345200+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT3G02260.11ASA1;BIG;CRM1;DOC1;LPR1;TIR3;UMB1|ATTENUATED SHADE AVOIDANCE 1;BIG;CORYMBOSA1;DARK OVER-EXPRESSION OF CAB 1;LOW PHOSPHATE-RESISTANT ROOT 1;TRANSPORT INHIBITOR RESPONSE 3;UMBRELLA 1
Prunus persicaPrupe.3G248400.1.p1auxin transport protein (BIG)
Prunus persicaPrupe.3G248400.3.p0.766auxin transport protein (BIG)
Pyrus communisPCP011557.11-
Pyrus x bretschneideriPbr022197.11-
Rubus occidentalisRo06_G048841-
Fragaria vescamrna04218.11auxin transport protein (BIG)
Vitis viniferaGSVIVT010365380011auxin transport protein (BIG)
Solanum lycopersicumSolyc02g089260.2.11auxin transport protein (BIG)
Populus trichocarpaPotri.017G101100.21auxin transport protein (BIG)
Nicotiana benthamianaNiben101Scf06560g02002.11Auxin transport protein BIG
Oryza sativaLOC_Os09g07300.11"BIG, putative, expressed"

Gene Ontology
GO termDescriptionCategory
GO:0004842ubiquitin-protein transferase activitymolecular_function
GO:0008270zinc ion bindingmolecular_function

KEGG
KODescriptionEnzyme
K10691E3 ubiquitin-protein ligase UBR4EC:2.3.2.27

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00569.13ZZ260226347.50E-09


Expression pattern
TOP