| Gene ID | Annotation |
|---|---|
| MD09G1077000 | Pentatricopeptide repeat (PPR) superfamily protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0379 | geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] CAAX-protein geranylgeranyltransferase complex mitochondrion Pseudo ARR-B CAAX-protein geranylgeranyltransferase activity protein geranylgeranylation chloroplast organization nuclear import |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD09G1077000 | mRNA | Chr09 | 5425071 | 5427700 | + |
| CDS: |
| MD09G1077000 |
| Protein: |
| MD09G1077000 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT3G29290.1 | 1 | emb2076|embryo defective 2076 |
| Prunus persica | Prupe.3G247100.1.p | 1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Pyrus communis | PCP044215.1 | 1 | - |
| Pyrus x bretschneideri | Pbr022210.1 | 1 | - |
| Rosa multiflora | Rmu_sc0037425.1_g000001.1 | 1 | - |
| Rubus occidentalis | Ro06_G04869 | 1 | - |
| Fragaria vesca | mrna04196.1 | 1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Vitis vinifera | GSVIVT01011494001 | 1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Solanum lycopersicum | Solyc02g088600.2.1 | 1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Populus trichocarpa | Potri.017G090500.1 | 1 | Pentatricopeptide repeat (PPR) superfamily protein |
| Nicotiana benthamiana | Niben101Scf09554g02022.1 | 1 | Pentatricopeptide repeat-containing protein |
| Oryza sativa | LOC_Os03g11310.1 | 1 | "PPR repeat domain containing protein, putative, expressed" |
| Zea mays | GRMZM2G107805_P01 | 1 | - |
| GO term | Description | Category |
|---|---|---|
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |