Gene detail

Detail information of MD10G1037900 Annotation

Gene ID	Annotation
MD10G1037900	Hypoxanthine-guanine phosphoribosyltransferase

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0163	pyrimidine ribonucleotide biosynthetic process

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD10G1037900	mRNA	Chr10	4982535	4984293	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G71750.1	1	HGPT\|Hypoxanthine-guanine phosphoribosyltransferase
Arabidopsis thaliana	AT1G71750.2	0.933	HGPT\|Hypoxanthine-guanine phosphoribosyltransferase
Pyrus communis	PCP040857.1	1	-
Pyrus x bretschneideri	Pbr035003.1	1	-
Rosa multiflora	Rmu_sc0000045.1_g000078.1	1	-
Rosa multiflora	Rmu_sc0013374.1_g000005.1	0.974	-
Rubus occidentalis	Ro02_G23471	1	-
Vitis vinifera	GSVIVT01013701001	1	Hypoxanthine-guanine phosphoribosyltransferase
Solanum lycopersicum	Solyc00g009060.2.1	1	Hypoxanthine-guanine phosphoribosyltransferase
Populus trichocarpa	Potri.005G198400.1	1	Hypoxanthine-guanine phosphoribosyltransferase
Nicotiana benthamiana	Niben101Scf08308g04020.1	1	Hypoxanthine phosphoribosyltransferase
Oryza sativa	LOC_Os05g08950.1	1	"phosphoribosyl transferase, putative, expressed"
Zea mays	GRMZM2G089021_P01	1	Hypoxanthine-guanine phosphoribosyltransferase

Gene Ontology

GO term	Description	Category
GO:0005737	cytoplasm	cellular component
GO:0004422	hypoxanthine phosphoribosyltransferase activity	molecular_function
GO:0006166	purine ribonucleoside salvage	biological_process

KEGG

KO	Description	Enzyme
K00760	hypoxanthine phosphoribosyltransferase	EC:2.4.2.8

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00156.23	Pribosyltran	17	171	2.10E-26

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	10.2626
SRR5252888	dormant buds	no	dormant buds(0 month)	4.52363
SRR5252889	dormant buds	no	dormant buds(0 month)	4.1101
SRR5252886	dormant buds	no	dormant buds(1 months)	2.47883
SRR5252887	dormant buds	no	dormant buds(1 months)	3.35301
SRR5252884	dormant buds	no	dormant buds(2 months)	4.39855
SRR5252882	dormant buds	no	dormant buds(3 months)	1.91805
SRR5252883	dormant buds	no	dormant buds(3 months)	3.44856
SRR5252880	dormant buds	no	dormant buds(4 months)	2.29707
SRR5252881	dormant buds	no	dormant buds(4 months)	4.03695
SRR5252878	bud break	no	bud break	5.33855
SRR5252879	bud break	no	bud break	4.54561
SRR3744766	flower	no	mature	13.5629
SRR3744767	flower	no	mature	13.7302
SRR3744768	flower	no	mature	14.5985
SRR6308190	stigmas	no	open flowers	13.5366
SRR6308181	styles	no	open flowers	9.03541
SRR6308188	filaments	no	open flowers	3.11309
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	3.20019
SRR6308192	pollen	no	open flowers	2.28677
SRR6308191	petals	no	open flowers	4.31231
SRR6308194	sepals	no	open flowers	5.62743
SRR6308193	receptacles	no	open flowers	7.82026
SRR6308189	ovaries	no	open flowers	8.32806
SRR3384922	fruit	no	1 week after full bloom	13.9183
SRR3384921	fruit	no	2 week after full bloom	14.8713
SRR3384920	fruit	no	3 week after full bloom	17.2024
SRR3384919	fruit	no	4 week after full bloom	13.9949
SRR3384923	fruit	no	5 week after full bloom	17.2942
SRR3384918	fruit	no	6 week after full bloom	15.7364
SRR3384917	fruit	no	8 week after full bloom	27.4324
SRR3384916	fruit	no	10 week after full bloom	30.1423
SRR3384915	fruit	no	12 week after full bloom	31.6704
SRR3384914	fruit	no	14 week after full bloom	29.1845
SRR3384913	fruit	no	16 week after full bloom	26.2052
SRR3384912	fruit	no	18 week after full bloom	28.9731
SRR3384911	fruit	no	19 week after full bloom	21.295
SRR3384910	fruit	no	20 week after full bloom	21.2343
SRR768128	whole fruit	no	25 days post anthesis	10.7749
SRR768129	whole fruit	no	35 days post anthesis	14.1989
SRR768130	whole fruit	no	60 days post anthesis	16.6641
SRR768131	whole fruit	no	87 days post anthesis	11.9459
SRR7343308	immature fruit flesh	no	immature	16.9959
SRR7343309	immature fruit flesh	no	immature	16.4441
SRR6320494	ripe fruit flesh	no	mature	12.1025
SRR5405143	ripe fruit peel	no	mature	44.6581
SRR6320572	ripe fruit peel	no	mature	50.7284
SRR7403504	fruit	uninfected	mature	36.4657
SRR7403506	fruit	uninfected	mature	35.5778
SRR7403507	fruit	uninfected	mature	34.8798
SRR7403500	fruit	infected with penicillium expansum	mature	32.273
SRR7403501	fruit	infected with penicillium expansum	mature	36.0624
SRR7403508	fruit	infected with penicillium expansum	mature	29.9861
SRR7403502	fruit	infected with penicillium expansum	mature	37.8595
SRR7403503	fruit	infected with penicillium expansum	mature	36.8221
SRR7403505	fruit	infected with penicillium expansum	mature	37.6897
SRR1613973	Central seeds	no	20DAPF	12.9029
SRR1613974	Central seeds	no	20DAPF	11.6119
SRR1613975	Central seeds	no	20DAPF	14.3725
SRR1613976	Lateral seeds	no	20DAPF	11.8485
SRR1613977	Lateral seeds	no	20DAPF	12.1098
SRR1613978	Lateral seeds	no	20DAPF	10.7796
SRR3744786	stem	no	mature	24.4345
SRR3744787	stem	no	mature	24.6505
SRR3744772	stem	no	mature	24.1712
SRX765691	seedling shoot apex	no	4-6 week old seedling	5.65132
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	6.65773
SRR1089478	leaf	Virus-free	plantlets	14.0795
SRR1089477	leaf	ASGV-infected	plantlets	9.05669
SRR767660	leaf	uninfected	fully developed	12.008
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	23.8991
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	8.7539
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	40.4765
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	25.9427
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	12.3027
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	9.32185
SRR6308182	young leaf	no	immature leaves	7.21067
SRR3744769	leaf	no	mature	21.4892
SRR3744770	leaf	no	mature	18.903
SRR3744771	leaf	no	mature	19.0136
SRR5405145	leaf	no	mature	16.2519
SRR6320561	leaf	no	mature	12.5454