Gene detail

Detail information of MD10G1042000 Annotation

Gene ID	Annotation
MD10G1042000	monooxygenase 1

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0088	extracellular region aspartic-type endopeptidase activity regulation of double fertilization forming a zygote and endosperm proteolysis

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD10G1042000	mRNA	Chr10	5423294	5425656	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G15760.1	1	MO1\|monooxygenase 1
Arabidopsis thaliana	AT4G15760.2	0.88	MO1\|monooxygenase 1
Pyrus communis	PCP036257.1	1	-
Pyrus x bretschneideri	Pbr012346.1	1	-
Solanum lycopersicum	Solyc04g025650.2.1	1	monooxygenase 1
Nicotiana benthamiana	Niben101Scf10336g03007.1	1	3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase
Nicotiana benthamiana	Niben101Scf02244g00007.1	0.642	3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase
Oryza sativa	LOC_Os02g27200.1	1	expressed protein
Zea mays	GRMZM2G087169_P01	1	-

Gene Ontology

GO term	Description	Category
GO:0008152	metabolic process	biological_process
GO:0016491	oxidoreductase activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.155923
SRR5252888	dormant buds	no	dormant buds(0 month)	2.26276
SRR5252889	dormant buds	no	dormant buds(0 month)	1.16501
SRR5252886	dormant buds	no	dormant buds(1 months)	1.43719
SRR5252887	dormant buds	no	dormant buds(1 months)	1.18802
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0.407754
SRR5252883	dormant buds	no	dormant buds(3 months)	0.74053
SRR5252880	dormant buds	no	dormant buds(4 months)	0.406942
SRR5252881	dormant buds	no	dormant buds(4 months)	0.301126
SRR5252878	bud break	no	bud break	1.08087
SRR5252879	bud break	no	bud break	0.374552
SRR3744766	flower	no	mature	2.9419
SRR3744767	flower	no	mature	3.00218
SRR3744768	flower	no	mature	3.20114
SRR6308190	stigmas	no	open flowers	0.107516
SRR6308181	styles	no	open flowers	0.554422
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	8.30381
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0.114995
SRR6308193	receptacles	no	open flowers	0.366813
SRR6308189	ovaries	no	open flowers	0.819569
SRR3384922	fruit	no	1 week after full bloom	2.036
SRR3384921	fruit	no	2 week after full bloom	1.72175
SRR3384920	fruit	no	3 week after full bloom	0.121283
SRR3384919	fruit	no	4 week after full bloom	1.06445
SRR3384923	fruit	no	5 week after full bloom	1.86473
SRR3384918	fruit	no	6 week after full bloom	1.36411
SRR3384917	fruit	no	8 week after full bloom	1.28441
SRR3384916	fruit	no	10 week after full bloom	1.00113
SRR3384915	fruit	no	12 week after full bloom	1.38195
SRR3384914	fruit	no	14 week after full bloom	0.70206
SRR3384913	fruit	no	16 week after full bloom	0.375868
SRR3384912	fruit	no	18 week after full bloom	0.0705465
SRR3384911	fruit	no	19 week after full bloom	0.202987
SRR3384910	fruit	no	20 week after full bloom	0.158933
SRR768128	whole fruit	no	25 days post anthesis	3.36648
SRR768129	whole fruit	no	35 days post anthesis	8.14998
SRR768130	whole fruit	no	60 days post anthesis	16.1998
SRR768131	whole fruit	no	87 days post anthesis	4.24131
SRR7343308	immature fruit flesh	no	immature	1.50405
SRR7343309	immature fruit flesh	no	immature	1.50124
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.388348
SRR7403506	fruit	uninfected	mature	0.633996
SRR7403507	fruit	uninfected	mature	0.752763
SRR7403500	fruit	infected with penicillium expansum	mature	0.0912458
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0.150939
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0.0757697
SRR1613973	Central seeds	no	20DAPF	31.3953
SRR1613974	Central seeds	no	20DAPF	29.8923
SRR1613975	Central seeds	no	20DAPF	31.9009
SRR1613976	Lateral seeds	no	20DAPF	31.1933
SRR1613977	Lateral seeds	no	20DAPF	38.5592
SRR1613978	Lateral seeds	no	20DAPF	35.2897
SRR3744786	stem	no	mature	0.911024
SRR3744787	stem	no	mature	0.930611
SRR3744772	stem	no	mature	0.928162
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.41556
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.293873
SRR1089478	leaf	Virus-free	plantlets	0.122111
SRR1089477	leaf	ASGV-infected	plantlets	0.568321
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.357541
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.9313
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.315808
SRR6308182	young leaf	no	immature leaves	3.46529
SRR3744769	leaf	no	mature	0.660252
SRR3744770	leaf	no	mature	0.759391
SRR3744771	leaf	no	mature	1.12251
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0.31962