Gene detail

Detail information of MD10G1062300 Annotation

Gene ID	Annotation
MD10G1062300	NAD(P)-linked oxidoreductase superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD10G1062300	mRNA	Chr10	8403348	8407079	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.8G083400.1.p	1	NAD(P)-linked oxidoreductase superfamily protein
Prunus persica	Prupe.8G083400.2.p	0.924	NAD(P)-linked oxidoreductase superfamily protein
Pyrus communis	PCP005374.1	1	-
Pyrus x bretschneideri	Pbr042781.1	1	-

Gene Ontology

GO term	Description	Category
GO:0055114	oxidation-reduction process	biological_process
GO:0016491	oxidoreductase activity	molecular_function

KEGG

KO	Description	Enzyme
K00085	aldose-6-phosphate reductase (NADPH2)	EC:1.1.1.200

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00248.17	Aldo_ket_red	15	291	3.00E-50

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	1323.15
SRR5252888	dormant buds	no	dormant buds(0 month)	11.2064
SRR5252889	dormant buds	no	dormant buds(0 month)	9.14453
SRR5252886	dormant buds	no	dormant buds(1 months)	5.55093
SRR5252887	dormant buds	no	dormant buds(1 months)	7.32686
SRR5252884	dormant buds	no	dormant buds(2 months)	12.3088
SRR5252882	dormant buds	no	dormant buds(3 months)	8.07766
SRR5252883	dormant buds	no	dormant buds(3 months)	28.4819
SRR5252880	dormant buds	no	dormant buds(4 months)	10.7995
SRR5252881	dormant buds	no	dormant buds(4 months)	6.49996
SRR5252878	bud break	no	bud break	4.39353
SRR5252879	bud break	no	bud break	4.28396
SRR3744766	flower	no	mature	13.8142
SRR3744767	flower	no	mature	13.7413
SRR3744768	flower	no	mature	16.7367
SRR6308190	stigmas	no	open flowers	99.206
SRR6308181	styles	no	open flowers	7.95432
SRR6308188	filaments	no	open flowers	14.3004
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	138.293
SRR6308192	pollen	no	open flowers	5.47713
SRR6308191	petals	no	open flowers	28.2584
SRR6308194	sepals	no	open flowers	1436.4
SRR6308193	receptacles	no	open flowers	4.61449
SRR6308189	ovaries	no	open flowers	7.33041
SRR3384922	fruit	no	1 week after full bloom	76.9115
SRR3384921	fruit	no	2 week after full bloom	24.9447
SRR3384920	fruit	no	3 week after full bloom	1.08801
SRR3384919	fruit	no	4 week after full bloom	4.02065
SRR3384923	fruit	no	5 week after full bloom	2.09103
SRR3384918	fruit	no	6 week after full bloom	3.12584
SRR3384917	fruit	no	8 week after full bloom	4.12883
SRR3384916	fruit	no	10 week after full bloom	3.11842
SRR3384915	fruit	no	12 week after full bloom	3.17313
SRR3384914	fruit	no	14 week after full bloom	8.01577
SRR3384913	fruit	no	16 week after full bloom	30.3468
SRR3384912	fruit	no	18 week after full bloom	77.2095
SRR3384911	fruit	no	19 week after full bloom	216.165
SRR3384910	fruit	no	20 week after full bloom	328.403
SRR768128	whole fruit	no	25 days post anthesis	6.25915
SRR768129	whole fruit	no	35 days post anthesis	9.03909
SRR768130	whole fruit	no	60 days post anthesis	3.78872
SRR768131	whole fruit	no	87 days post anthesis	3.8024
SRR7343308	immature fruit flesh	no	immature	0.843503
SRR7343309	immature fruit flesh	no	immature	1.26312
SRR6320494	ripe fruit flesh	no	mature	4.42119
SRR5405143	ripe fruit peel	no	mature	6.13398
SRR6320572	ripe fruit peel	no	mature	4.16446
SRR7403504	fruit	uninfected	mature	309.76
SRR7403506	fruit	uninfected	mature	311.708
SRR7403507	fruit	uninfected	mature	310.047
SRR7403500	fruit	infected with penicillium expansum	mature	99.1022
SRR7403501	fruit	infected with penicillium expansum	mature	107.909
SRR7403508	fruit	infected with penicillium expansum	mature	97.8126
SRR7403502	fruit	infected with penicillium expansum	mature	22.9239
SRR7403503	fruit	infected with penicillium expansum	mature	25.1317
SRR7403505	fruit	infected with penicillium expansum	mature	27.3463
SRR1613973	Central seeds	no	20DAPF	3.22793
SRR1613974	Central seeds	no	20DAPF	2.75749
SRR1613975	Central seeds	no	20DAPF	2.93159
SRR1613976	Lateral seeds	no	20DAPF	4.21919
SRR1613977	Lateral seeds	no	20DAPF	4.25514
SRR1613978	Lateral seeds	no	20DAPF	4.77467
SRR3744786	stem	no	mature	2.2478
SRR3744787	stem	no	mature	2.45377
SRR3744772	stem	no	mature	2.0231
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.79252
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.00049
SRR1089478	leaf	Virus-free	plantlets	294.078
SRR1089477	leaf	ASGV-infected	plantlets	340.579
SRR767660	leaf	uninfected	fully developed	3231.58
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	2303.44
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1636.89
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	1558.88
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	580.416
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1789.19
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	1151.59
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	991.624
SRR6308182	young leaf	no	immature leaves	71.1203
SRR3744769	leaf	no	mature	41.2291
SRR3744770	leaf	no	mature	40.5631
SRR3744771	leaf	no	mature	39.5695
SRR5405145	leaf	no	mature	463.161
SRR6320561	leaf	no	mature	611.3