Detail information of MD10G1075500 Annotation
Gene IDAnnotation
MD10G1075500cold

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD10G1075500mRNAChr101071772010718925-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Prunus persicaPrupe.8G096400.1.p1"cold, circadian rhythm, and RNA binding 1"
Pyrus communisPCP001238.11-
Pyrus x bretschneideriPbr035163.11-
Fragaria vescamrna25231.11"cold, circadian rhythm, and rna binding 2"
Vitis viniferaGSVIVT010319730011"cold, circadian rhythm, and rna binding 2"
Solanum lycopersicumSolyc01g109660.2.11"cold, circadian rhythm, and RNA binding 1"
Solanum lycopersicumSolyc10g047130.1.11RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Solanum lycopersicumSolyc03g071560.2.11RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain
Populus trichocarpaPotri.009G116400.11"cold, circadian rhythm, and RNA binding 1"
Nicotiana benthamianaNiben101Scf05279g01002.11Glycine-rich RNA-binding protein 3 (Fragments)
Oryza sativaLOC_Os03g46770.11"RNA recognition motif containing protein, expressed"
Oryza sativaLOC_Os12g43600.11"RNA recognition motif containing protein, expressed"
Zea maysGRMZM2G165901_P011protein_coding

Gene Ontology
GO termDescriptionCategory
GO:0000166nucleotide bindingmolecular_function
GO:0003676nucleic acid bindingmolecular_function

KEGG
KODescriptionEnzyme
K13195cold-inducible RNA-binding protein-

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00076.18RRM_1571259.50E-22


Expression pattern
TOP