| Gene ID | Annotation |
|---|---|
| MD10G1084800 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0730 | protein phosphatase 4 regulatory subunit 3 gravitropism 5'-3' exoribonuclease 4 [EC:3.1.13.-] response to red or far red light 5'-3' exoribonuclease activity nuclear-transcribed mRNA catabolic process response to 1-aminocyclopropane-1-carboxylic acid miRNA catabolic process deadenylation-independent decapping of nuclear-transcribed mRNA reproduction |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD10G1084800 | mRNA | Chr10 | 12478672 | 12480138 | + |
| CDS: |
| MD10G1084800 |
| Protein: |
| MD10G1084800 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT2G15980.1 | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Prunus persica | Prupe.8G107700.1.p | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Pyrus communis | PCP013342.1 | 1 | - |
| Pyrus x bretschneideri | Pbr039856.3 | 1 | - |
| Pyrus x bretschneideri | Pbr017864.1 | 0.66 | - |
| Rosa multiflora | Rmu_sc0027529.1_g000005.1 | 1 | - |
| Rosa multiflora | Rmu_sc0038123.1_g000001.1 | 0.98 | - |
| Fragaria vesca | mrna07390.1 | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Solanum lycopersicum | Solyc10g051010.1.1 | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Populus trichocarpa | Potri.004G149400.1 | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| Nicotiana benthamiana | Niben101Scf00321g03006.1 | 1 | Pentatricopeptide repeat-containing protein |
| Nicotiana benthamiana | Niben101Scf19007g00001.1 | 0.88 | Pentatricopeptide repeat-containing protein |
| Oryza sativa | LOC_Os12g21930.3 | 1 | "PPR repeat containing protein, expressed" |
| GO term | Description | Category |
|---|---|---|
| -- | -- | -- |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |