Gene detail

Detail information of MD10G1090900 Annotation

Gene ID	Annotation
MD10G1090900	aminopeptidase M1

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0298	puromycin-sensitive aminopeptidase [EC:3.4.11.-]

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD10G1090900	mRNA	Chr10	13615192	13621226	-

Sequences

CDS:

MD10G1090900

CTTTGATTTTTTTTAAACATTGATTACACTTTCAATGCATTACCTTTGACGTTTGACTTGCGCGCACGACGTTAATATCGCCTATGATCATTCTACTTCTTACAGAACAGAGGAGCAACTATCGTGACACACGAAGGCGGAGATGGAGCAGTTCAAAGGCCAACCGCGGCTTCCTAAATTCGCCGTGCCAAAGCGATACTCCATACGTCTGAAACCCGACCTCATCGCTTGCAAATTCGCCGGCTCCGTCTCCATCGACCTCGATATCGTCTCCGATACTCGATTCATCGCCCTCAACGCTGCCGAGCTCTCCGTCGATGCCGCTTCCGTCTCTTTCACTCACTCTTCCAAGATCTTTAAGCCTTCAAAAGTTGAGATATTCGACGAAGACGGGGTTTTGGTTTTGGAGTTTGGAGAGACACTTCCGATTGGTTTGGGAGTTTTGGCTATTGGGTTTGAAGGTATTTTGAATGACAAGATGAAGGGATTTTTTAGAAGTACATATGAGCATAACAGTGAGAAGAAAAATATGGCAGTTACGCAGTTTCAACCAGTTGATGCCAGGCGGTGCTTTCCATGTTGGGATGAACCTGCTTGGAAGGCTACATTCAAGATTATATTGGATGATGTTCCGTCCGAATTAGTAGCTCTTTCCAACATGCCGGTTGGAGAAGAAAAAGTGGATGGACATATGAAGACAGTTACATATCAAGAATCTCCAATCATGTCTACATATTTGGTGGCCATAGTTGTTGGGTTGTTTGATTATATTGAAGATCATACTTCTGATGGGGTCATAGTGCGGGTATATTGTCCTGTTGGCAAGGCAGACCAAGGGAAGTTTGCTTTGGACCTTGCTGTCAGGACTCTTGAATTTTACAAAGATTATTTTTCTGTGCCGTACTCTTTGCCCAAATTGGATATGGTTGCAATTCCTGATTTTCTTGGGGCCATGGAGAATTATGGTTTAGTTACGTACCAAGAATCAGCTTTGCTCTTTGATGAACAAAATTCTGCAGCTGCCAACAAGCAAATGGTTTCAACTGCTGTGACACATGAATTGGCGCACCAGTGGTTTGGCAATCTTGTAACAATGGAATGGTGGACACACTTATGGCTGAACGAGGGATTTGCAACATGGGTGAGCTATTTAGCTACTGATAGCTTGTTCCCAGAGTGGAAAGTATGGACTCAGTTTGTTGATGAAAGTGCTAGGGGTCTTAAGCTGGATGGGCTTGAAGAATCTCACCCCATCGAGGTAGAGATCAATCATGCTGCTGAGGTTGATGAAATATTTGATGCAATAAGTTATAGAAAAGGAGCTTCTATTATTCGGATGCTACAAAGCTATCTTGGTGCGGAATGCTTCCAGTCACTTGCTTCATACATAAGAAAGCATGCTTCCTCAAATACTTTCACAGAAGATTTATGGGCTGCCCTTGAGGAGATATCTGGTGAACCTGTGAACAAGCTAATGAATTCATGGACTCAGCAAATGGGTTACCCTGTTATTTCTGTCAAAGTGAAAGATCAGAAATTGCAATTTGACCAGACACAATTCTACTCGAGTGGTTCCCAAGGTGATGGGCAATGGATTGTGCCAATAACATTATGCTGTGGCTCATATGATGTGCACAAGAGATTCCTACTACGAAACAAGTCTGAAAGTCTCGACATAAAAGAATTTCTGGGCTGCTCCCTAGCGGAGAAGGGATGTAGAAGTGCAAACAATAAAAACAATGCCTTATGCAGTTGGATCAAAGTCAACTTGGATCAGACTGGTTTTTACAGGGTGATATATTCAGATGAACTTTTACCTGCACTTAGAAATGTTATAGAAAAGAAAGACTTGTCTGCAACTGACAGATACGGAATCTTGGATGATTCATTTGCCCTTTCTATGGCTCGCCAGCAGTCTTTTGCTTCATTGCTTACGTTGTTGGATGCTTACAGAGAGGAACTTGACTATACAGTGCTGTCAAATTTGATTGCCATATGTTATAAGCTGGCAAGAATTGCAGCTGATGCTGTACCCGAGCTACTGAATCTCATAAAACAATCGTTTATTAGCCTTTTCCAGTACTCTGCAGAAAAGCTTGGTTGGGAGCCTAAACCTGGTGAGAGCCATTTAGATTCAATGCTAAGAGGAGAAATTTTAACTGCCCTTGCTGTGTTTGGACATGACCCAACAATTAATGAAGCAAGTAGGCGTTTTCGTGAATTCTTAGATAACCGAAATACGCCAGTCCTTCCTCCCGACATAAGAAAGGCAGTGTATGTGGCGGTAATGCAAAGAGTAAGCATGTCTAACAGATGGGGCTACGAATCTCTTCTTAGAGTTTACAGAGAGGCTGATCTAAGCGAGGAGAAAAACCGCATTATAAAATCATTAGCATCTTGTCCAGATCCGAGCATAGTACTGGAAGTTCTCAACCTTTTATTGTCTTCTGAGGTCCGCCTTCAGGATGCTGCCCGTGGGCTATCTTCTGTTAGTAGTGAAGGACGGGAAACAGCTTTGACGTGGCTGAAGGATAACTGGGAGCACATCTCCAAGACCTGGGGTTCTGGATTTGTAATTGCTAGCTTTGTCAGTGCAGTTGTTTCACCGTTGGCTTCATTTGAAAAGGTTAAGGAAGTAGATGAGTTCTTTAAGGTTCATCCCACCCCCTCGATAACCAGAACCTTGAAGCAGAGCATTGAGCGTGTGCAGATTAACGCCAAGTGGGTTCAGAGTGTTCAGGGTGAGACAGATCTTGCCGATGTTTTGAACGAGTTGGCATACAGGAAAGACTAGCTAGCCTTATAATCATGCTGGAAGCATTCATGGAATGCAATTCTTTGCCTTCTGGTTCGTTGATAAGTTCATTTAGGTGTTACCGGAAAAACTGTCCGCATTCTGCTGTGGGTTTTCAAACTATAATTGACAACAGTCATGAGCAGAGCCTTAGGATGTAAATCTTTGTATTTACCGACTCAGTGCTCGAGCTGCAGTTACCGTTACAAAAATTAGTCCAACCTTCAGAACACTACAAGAAATCAGCACATTGCAGGTTAAGAGAAAGCTAATGTACCATCAATGGAAGGAGCTGATTCCTTCGCTTGAAAAGCTTCACATGCTTTAGATATTTCTGCTATAACATCCCTCATATACGGTTGCAGAATGTTTGATTCTTGAAGATCGCGAAATGCATTGCAAGCCTGCATCAAGAGTAGCAATGGTGCCTCAATTTTAATTAAATTGGAGCAATGGTCTCTTAACTAAAAATTTATTACTATTGGTCCCTCAACTTATCAAAATGTATAGCTATAGTCATTTTCATCAATTTCGTCAAAATTTTGTCAAAATAAGTTATGTTGGAATAACCATTTATATAATTAGGGTTCCTCAACTCATCAAAGTGTGTAATTAT

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus communis	PCP023544.1	1	-
Pyrus x bretschneideri	Pbr033637.2	1	-

Gene Ontology

GO term	Description	Category
GO:0006508	proteolysis	biological_process
GO:0008237	metallopeptidase activity	molecular_function
GO:0008270	zinc ion binding	molecular_function

KEGG

KO	Description	Enzyme
K08776	puromycin-sensitive aminopeptidase	EC:3.4.11.-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF11838.4	ERAP1_C	538	855	4.10E-64

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	6.03943
SRR5252888	dormant buds	no	dormant buds(0 month)	22.3006
SRR5252889	dormant buds	no	dormant buds(0 month)	17.7041
SRR5252886	dormant buds	no	dormant buds(1 months)	11.8475
SRR5252887	dormant buds	no	dormant buds(1 months)	15.9888
SRR5252884	dormant buds	no	dormant buds(2 months)	24.0907
SRR5252882	dormant buds	no	dormant buds(3 months)	22.2148
SRR5252883	dormant buds	no	dormant buds(3 months)	33.1823
SRR5252880	dormant buds	no	dormant buds(4 months)	27.1028
SRR5252881	dormant buds	no	dormant buds(4 months)	26.9309
SRR5252878	bud break	no	bud break	29.1787
SRR5252879	bud break	no	bud break	13.2891
SRR3744766	flower	no	mature	18.9988
SRR3744767	flower	no	mature	19.2178
SRR3744768	flower	no	mature	19.2845
SRR6308190	stigmas	no	open flowers	11.3682
SRR6308181	styles	no	open flowers	7.72386
SRR6308188	filaments	no	open flowers	13.0129
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	9.56154
SRR6308192	pollen	no	open flowers	0.302742
SRR6308191	petals	no	open flowers	9.33052
SRR6308194	sepals	no	open flowers	8.22696
SRR6308193	receptacles	no	open flowers	7.89494
SRR6308189	ovaries	no	open flowers	5.94764
SRR3384922	fruit	no	1 week after full bloom	2.57014
SRR3384921	fruit	no	2 week after full bloom	3.26255
SRR3384920	fruit	no	3 week after full bloom	3.71896
SRR3384919	fruit	no	4 week after full bloom	4.6496
SRR3384923	fruit	no	5 week after full bloom	3.75652
SRR3384918	fruit	no	6 week after full bloom	3.76796
SRR3384917	fruit	no	8 week after full bloom	3.67905
SRR3384916	fruit	no	10 week after full bloom	4.51387
SRR3384915	fruit	no	12 week after full bloom	6.30741
SRR3384914	fruit	no	14 week after full bloom	6.89074
SRR3384913	fruit	no	16 week after full bloom	7.06711
SRR3384912	fruit	no	18 week after full bloom	8.52331
SRR3384911	fruit	no	19 week after full bloom	10.0633
SRR3384910	fruit	no	20 week after full bloom	10.5835
SRR768128	whole fruit	no	25 days post anthesis	4.65147
SRR768129	whole fruit	no	35 days post anthesis	1.88841
SRR768130	whole fruit	no	60 days post anthesis	2.90658
SRR768131	whole fruit	no	87 days post anthesis	7.22759
SRR7343308	immature fruit flesh	no	immature	15.4453
SRR7343309	immature fruit flesh	no	immature	11.8266
SRR6320494	ripe fruit flesh	no	mature	29.4613
SRR5405143	ripe fruit peel	no	mature	27.7759
SRR6320572	ripe fruit peel	no	mature	35.3414
SRR7403504	fruit	uninfected	mature	19.4677
SRR7403506	fruit	uninfected	mature	20.3588
SRR7403507	fruit	uninfected	mature	19.2664
SRR7403500	fruit	infected with penicillium expansum	mature	8.63218
SRR7403501	fruit	infected with penicillium expansum	mature	7.52647
SRR7403508	fruit	infected with penicillium expansum	mature	8.62375
SRR7403502	fruit	infected with penicillium expansum	mature	11.0568
SRR7403503	fruit	infected with penicillium expansum	mature	12.4426
SRR7403505	fruit	infected with penicillium expansum	mature	11.8259
SRR1613973	Central seeds	no	20DAPF	4.87309
SRR1613974	Central seeds	no	20DAPF	4.98341
SRR1613975	Central seeds	no	20DAPF	4.02942
SRR1613976	Lateral seeds	no	20DAPF	3.99799
SRR1613977	Lateral seeds	no	20DAPF	3.62684
SRR1613978	Lateral seeds	no	20DAPF	4.17344
SRR3744786	stem	no	mature	43.0407
SRR3744787	stem	no	mature	44.4976
SRR3744772	stem	no	mature	44.4974
SRX765691	seedling shoot apex	no	4-6 week old seedling	6.51324
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	6.94232
SRR1089478	leaf	Virus-free	plantlets	5.32179
SRR1089477	leaf	ASGV-infected	plantlets	5.66733
SRR767660	leaf	uninfected	fully developed	3.15844
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	1.88745
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.92985
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	3.54723
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	6.98897
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	8.55568
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	7.58584
SRR6308182	young leaf	no	immature leaves	4.91002
SRR3744769	leaf	no	mature	40.2364
SRR3744770	leaf	no	mature	41.929
SRR3744771	leaf	no	mature	42.5922
SRR5405145	leaf	no	mature	9.37085
SRR6320561	leaf	no	mature	6.76077