Gene detail

Detail information of MD10G1142800 Annotation

Gene ID	Annotation
MD10G1142800	Peptidase M20/M25/M40 family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD10G1142800	mRNA	Chr10	22870441	22874477	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G38220.2	1	AQI\|aquaporin interactor
Arabidopsis thaliana	AT4G38220.1	0.953	AQI\|aquaporin interactor
Pyrus communis	PCP005612.1	1	-
Pyrus x bretschneideri	Pbr032123.1	1	-
Rosa multiflora	Rmu_sc0001705.1_g000022.1	1	-
Rubus occidentalis	Ro02_G15118	1	-
Vitis vinifera	GSVIVT01023859001	1	Peptidase M20/M25/M40 family protein
Solanum lycopersicum	Solyc01g112280.2.1	1	Peptidase M20/M25/M40 family protein
Populus trichocarpa	Potri.009G169300.1	1	Peptidase M20/M25/M40 family protein
Nicotiana benthamiana	Niben101Scf03004g03024.1	1	Succinyl-diaminopimelate desuccinylase
Oryza sativa	LOC_Os08g40110.1	1	"peptidase, putative, expressed"
Zea mays	GRMZM2G088627_P01	1	Aminoacylase-1

Gene Ontology

GO term	Description	Category
GO:0005737	cytoplasm	cellular component
GO:0006520	cellular amino acid metabolic process	biological_process
GO:0008237	metallopeptidase activity	molecular_function
GO:0006508	proteolysis	biological_process
GO:0004046	aminoacylase activity	molecular_function

KEGG

KO	Description	Enzyme
K14677	aminoacylase	EC:3.5.1.14

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	2.44369
SRR5252888	dormant buds	no	dormant buds(0 month)	0.273792
SRR5252889	dormant buds	no	dormant buds(0 month)	0
SRR5252886	dormant buds	no	dormant buds(1 months)	0.231865
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0.215048
SRR5252880	dormant buds	no	dormant buds(4 months)	0.0984792
SRR5252881	dormant buds	no	dormant buds(4 months)	0.218616
SRR5252878	bud break	no	bud break	0.0980882
SRR5252879	bud break	no	bud break	0.0543846
SRR3744766	flower	no	mature	2.2035
SRR3744767	flower	no	mature	1.96328
SRR3744768	flower	no	mature	2.02513
SRR6308190	stigmas	no	open flowers	2.35543
SRR6308181	styles	no	open flowers	0.607906
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	1.25576
SRR6308192	pollen	no	open flowers	0.594874
SRR6308191	petals	no	open flowers	0.0866818
SRR6308194	sepals	no	open flowers	0.840059
SRR6308193	receptacles	no	open flowers	0.46898
SRR6308189	ovaries	no	open flowers	0.381178
SRR3384922	fruit	no	1 week after full bloom	1.06233
SRR3384921	fruit	no	2 week after full bloom	1.74986
SRR3384920	fruit	no	3 week after full bloom	0.572289
SRR3384919	fruit	no	4 week after full bloom	0.854072
SRR3384923	fruit	no	5 week after full bloom	1.62443
SRR3384918	fruit	no	6 week after full bloom	2.7986
SRR3384917	fruit	no	8 week after full bloom	23.0617
SRR3384916	fruit	no	10 week after full bloom	29.5553
SRR3384915	fruit	no	12 week after full bloom	30.9566
SRR3384914	fruit	no	14 week after full bloom	35.0737
SRR3384913	fruit	no	16 week after full bloom	47.805
SRR3384912	fruit	no	18 week after full bloom	41.841
SRR3384911	fruit	no	19 week after full bloom	43.0285
SRR3384910	fruit	no	20 week after full bloom	32.6517
SRR768128	whole fruit	no	25 days post anthesis	0.77872
SRR768129	whole fruit	no	35 days post anthesis	0.85515
SRR768130	whole fruit	no	60 days post anthesis	5.73496
SRR768131	whole fruit	no	87 days post anthesis	18.8087
SRR7343308	immature fruit flesh	no	immature	0.545625
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	13.8498
SRR5405143	ripe fruit peel	no	mature	22.3701
SRR6320572	ripe fruit peel	no	mature	24.9644
SRR7403504	fruit	uninfected	mature	25.5529
SRR7403506	fruit	uninfected	mature	27.9144
SRR7403507	fruit	uninfected	mature	25.9678
SRR7403500	fruit	infected with penicillium expansum	mature	1.19354
SRR7403501	fruit	infected with penicillium expansum	mature	1.57439
SRR7403508	fruit	infected with penicillium expansum	mature	1.34777
SRR7403502	fruit	infected with penicillium expansum	mature	4.1681
SRR7403503	fruit	infected with penicillium expansum	mature	3.79786
SRR7403505	fruit	infected with penicillium expansum	mature	3.85431
SRR1613973	Central seeds	no	20DAPF	2.08328
SRR1613974	Central seeds	no	20DAPF	1.30804
SRR1613975	Central seeds	no	20DAPF	1.53136
SRR1613976	Lateral seeds	no	20DAPF	1.62433
SRR1613977	Lateral seeds	no	20DAPF	1.20943
SRR1613978	Lateral seeds	no	20DAPF	1.046
SRR3744786	stem	no	mature	7.96637
SRR3744787	stem	no	mature	8.02702
SRR3744772	stem	no	mature	9.49018
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.0915793
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.116107
SRR1089478	leaf	Virus-free	plantlets	11.6414
SRR1089477	leaf	ASGV-infected	plantlets	8.82329
SRR767660	leaf	uninfected	fully developed	4.05683
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.848507
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	2.32908
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	4.92967
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	8.59996
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	4.71261
SRR6308182	young leaf	no	immature leaves	0.0562713
SRR3744769	leaf	no	mature	4.24594
SRR3744770	leaf	no	mature	3.69032
SRR3744771	leaf	no	mature	4.03666
SRR5405145	leaf	no	mature	14.0728
SRR6320561	leaf	no	mature	7.57507