Gene detail

Detail information of MD10G1186000 Annotation

Gene ID	Annotation
MD10G1186000	nodulin MtN21 /EamA-like transporter family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD10G1186000	mRNA	Chr10	28023958	28025969	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.8G225600.1.p	1	nodulin MtN21 /EamA-like transporter family protein
Prunus persica	Prupe.8G225600.3.p	0.642	nodulin MtN21 /EamA-like transporter family protein
Pyrus communis	PCP032615.1	1	-
Pyrus x bretschneideri	Pbr011111.1	1	-
Rosa multiflora	Rmu_sc0001038.1_g000027.1	1	-
Rubus occidentalis	Ro02_G23516	1	-
Fragaria vesca	mrna08055.1	1	nodulin MtN21 /EamA-like transporter family protein
Populus trichocarpa	Potri.002G040200.1	1	nodulin MtN21 /EamA-like transporter family protein

Gene Ontology

GO term	Description	Category
GO:0016020	membrane	cellular component

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	5.55976
SRR5252888	dormant buds	no	dormant buds(0 month)	0.1989
SRR5252889	dormant buds	no	dormant buds(0 month)	0.30722
SRR5252886	dormant buds	no	dormant buds(1 months)	0
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0
SRR5252882	dormant buds	no	dormant buds(3 months)	0
SRR5252883	dormant buds	no	dormant buds(3 months)	0.0781125
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0
SRR5252878	bud break	no	bud break	0
SRR5252879	bud break	no	bud break	0.553119
SRR3744766	flower	no	mature	0.0301697
SRR3744767	flower	no	mature	0
SRR3744768	flower	no	mature	0
SRR6308190	stigmas	no	open flowers	0
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0.121148
SRR6308193	receptacles	no	open flowers	0.096609
SRR6308189	ovaries	no	open flowers	0
SRR3384922	fruit	no	1 week after full bloom	0.536909
SRR3384921	fruit	no	2 week after full bloom	0.508525
SRR3384920	fruit	no	3 week after full bloom	0.255866
SRR3384919	fruit	no	4 week after full bloom	1.00462
SRR3384923	fruit	no	5 week after full bloom	3.09096
SRR3384918	fruit	no	6 week after full bloom	2.18965
SRR3384917	fruit	no	8 week after full bloom	1.44516
SRR3384916	fruit	no	10 week after full bloom	2.34673
SRR3384915	fruit	no	12 week after full bloom	1.52715
SRR3384914	fruit	no	14 week after full bloom	1.07717
SRR3384913	fruit	no	16 week after full bloom	0.71366
SRR3384912	fruit	no	18 week after full bloom	0.967393
SRR3384911	fruit	no	19 week after full bloom	1.85569
SRR3384910	fruit	no	20 week after full bloom	0.726475
SRR768128	whole fruit	no	25 days post anthesis	0.726148
SRR768129	whole fruit	no	35 days post anthesis	1.06322
SRR768130	whole fruit	no	60 days post anthesis	1.03985
SRR768131	whole fruit	no	87 days post anthesis	1.11815
SRR7343308	immature fruit flesh	no	immature	0.396676
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0
SRR1613974	Central seeds	no	20DAPF	0.0137324
SRR1613975	Central seeds	no	20DAPF	0
SRR1613976	Lateral seeds	no	20DAPF	0
SRR1613977	Lateral seeds	no	20DAPF	0
SRR1613978	Lateral seeds	no	20DAPF	0.0174188
SRR3744786	stem	no	mature	0.155212
SRR3744787	stem	no	mature	0.399376
SRR3744772	stem	no	mature	0.214482
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.316693
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.361309
SRR1089478	leaf	Virus-free	plantlets	0.643715
SRR1089477	leaf	ASGV-infected	plantlets	1.09851
SRR767660	leaf	uninfected	fully developed	3.52485
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.41265
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.169611
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.499415
SRR6308182	young leaf	no	immature leaves	0.0811225
SRR3744769	leaf	no	mature	0.0950799
SRR3744770	leaf	no	mature	0.0668642
SRR3744771	leaf	no	mature	0.0659046
SRR5405145	leaf	no	mature	4.81915
SRR6320561	leaf	no	mature	2.35789