Detail information of MD10G1231100 Annotation
Gene IDAnnotation
MD10G1231100K-box region and MADS-box transcription factor family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0088extracellular region
aspartic-type endopeptidase activity
regulation of double fertilization forming a zygote and endosperm
proteolysis

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD10G1231100mRNAChr103277945632782866+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Transcription Factors FamilyMIKC
Epigenetic RegulatorsFLCP

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT5G23260.21ABS;AGL32;TT16|ARABIDOPSIS BSISTER;AGAMOUS-like 32;TRANSPARENT TESTA16
Arabidopsis thalianaAT5G23260.10.952ABS;AGL32;TT16|ARABIDOPSIS BSISTER;AGAMOUS-like 32;TRANSPARENT TESTA16
Arabidopsis thalianaAT5G23260.30.889ABS;AGL32;TT16|ARABIDOPSIS BSISTER;AGAMOUS-like 32;TRANSPARENT TESTA16
Pyrus communisPCP004454.11-
Pyrus x bretschneideriPbr021448.11-
Rosa multifloraRmu_sc0000256.1_g000010.11-
Rubus occidentalisRo06_G238731-
Fragaria vescamrna20015.11K-box region and MADS-box transcription factor family protein
Vitis viniferaGSVIVT010121100011K-box region and MADS-box transcription factor family protein
Solanum lycopersicumSolyc11g005120.1.11K-box region and MADS-box transcription factor family protein
Populus trichocarpaPotri.012G125600.11K-box region and MADS-box transcription factor family protein
Nicotiana benthamianaNiben101Scf02452g06018.11MADS-box transcription factor 29
Oryza sativaLOC_Os02g07430.11"OsMADS29 - MADS-box family gene with MIKCc type-box, expressed"
Oryza sativaLOC_Os06g45650.11"OsMADS30 - MADS-box family gene with MIKCc type-box, expressed"
Zea maysGRMZM2G110153_P011Putative MADS-domain transcription factor;
Zea maysGRMZM2G135018_P011-
Zea maysGRMZM2G005155_P010.95MADS transcription factor;
Zea maysGRMZM2G152862_P010.706Putative MADS-box transcription factor family protein isoform 1; Putative MADS-box transcription factor family protein isoform 2;

Gene Ontology
GO termDescriptionCategory
GO:0003700transcription factor activity, sequence-specific DNA bindingmolecular_function
GO:0005634nucleuscellular component
GO:0003677DNA bindingmolecular_function
GO:0046983protein dimerization activitymolecular_function

KEGG
KODescriptionEnzyme
K09260MADS-box transcription enhancer factor 2A-

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00319.14SRF-TF10572.20E-22


Expression pattern
TOP