| Gene ID | Annotation |
|---|---|
| MD10G1231900 | 20S proteasome alpha subunit E1 |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0969 | proteasome-mediated ubiquitin-dependent protein catabolic process threonine-type endopeptidase activity response to misfolded protein fatty acid beta-oxidation proteasome core complex assembly cytosol proteasome core complex proteasome regulatory particle cytosolic ribosome proteasome core complex gluconeogenesis 20S proteasome subunit alpha 5 [EC:3.4.25.1] ribonuclease activity glycolytic process post-embryonic root development response to cadmium ion toxin catabolic process photomorphogenesis vacuolar membrane response to salt stress proteasome assembly regulation of unidimensional cell growth 20S proteasome subunit beta 3 [EC:3.4.25.1] 26S proteasome regulatory subunit N8 26S proteasome regulatory subunit N12 cullin deneddylation leaf development DNA endoreduplication U4/U6.U5 tri-snRNP-associated protein 1 20S proteasome subunit beta 7 [EC:3.4.25.1] skotomorphogenesis peptidase activity |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD10G1231900 | mRNA | Chr10 | 32833606 | 32837507 | + |
| CDS: |
| MD10G1231900 |
| Protein: |
| MD10G1231900 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G53850.2 | 1 | ATPAE1;PAE1|ARABIDOPSIS 20S PROTEASOME ALPHA SUBUNIT E1;20S proteasome alpha subunit E1 |
| Arabidopsis thaliana | AT1G53850.1 | 1 | ATPAE1;PAE1|ARABIDOPSIS 20S PROTEASOME ALPHA SUBUNIT E1;20S proteasome alpha subunit E1 |
| Arabidopsis thaliana | AT3G14290.1 | 1 | PAE2|20S proteasome alpha subunit E2 |
| Prunus persica | Prupe.4G112400.1.p | 1 | 20S proteasome alpha subunit E2 |
| Pyrus communis | PCP004459.1 | 1 | - |
| Pyrus x bretschneideri | Pbr021440.1 | 1 | - |
| Rosa multiflora | Rmu_sc0000116.1_g000001.1 | 1 | - |
| Rubus occidentalis | Ro03_G10834 | 1 | - |
| Fragaria vesca | mrna20027.1 | 1 | 20S proteasome alpha subunit E2 |
| Vitis vinifera | GSVIVT01016670001 | 1 | 20S proteasome alpha subunit E2 |
| Solanum lycopersicum | Solyc08g016510.2.1 | 0.727 | 20S proteasome alpha subunit E2 |
| Solanum lycopersicum | Solyc02g070510.2.1 | 1 | 20S proteasome alpha subunit E2 |
| Solanum lycopersicum | Solyc10g077030.1.1 | 1 | 20S proteasome alpha subunit G1 |
| Solanum lycopersicum | Solyc09g082320.2.1 | 1 | 20S proteasome beta subunit D1 |
| Populus trichocarpa | Potri.001G162900.1 | 1 | 20S proteasome alpha subunit E2 |
| Nicotiana benthamiana | Niben101Scf02232g03001.1 | 1 | Proteasome subunit alpha type-4 |
| Nicotiana benthamiana | Niben101Scf01259g10004.1 | 1 | Proteasome subunit alpha type-4 |
| Oryza sativa | LOC_Os11g40140.1 | 1 | "peptidase, T1 family, putative, expressed" |
| Zea mays | GRMZM2G056870_P01 | 1 | Proteasome subunit alpha type |
| GO term | Description | Category |
|---|---|---|
| GO:0005839 | proteasome core complex | cellular component |
| GO:0006511 | ubiquitin-dependent protein catabolic process | biological_process |
| GO:0004298 | threonine-type endopeptidase activity | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| K02729 | 20S proteasome subunit alpha 5 | EC:3.4.25.1 |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF10584.5 | Proteasome_A_N | 8 | 30 | 1.30E-13 |
| PF00227.22 | Proteasome | 31 | 218 | 6.80E-65 |
 |