Detail information of MD10G1300200 Annotation
Gene IDAnnotation
MD10G1300200SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD10G1300200mRNAChr103874675238755015-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Transcription Factors FamilySNF2
Epigenetic RegulatorsCHR

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT1G61140.11EDA16|embryo sac development arrest 16
Arabidopsis thalianaAT1G61140.30.789EDA16|embryo sac development arrest 16
Arabidopsis thalianaAT1G61140.20.626EDA16|embryo sac development arrest 16
Pyrus communisPCP011850.11-
Rosa multifloraRmu_ssc0000182.1_g000011.11-
Rosa multifloraRmu_co8522595.1_g000001.10.865-
Rubus occidentalisRo03_G331301-
Fragaria vescamrna30445.11SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Vitis viniferaGSVIVT010063390011SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Solanum lycopersicumSolyc03g006570.2.11SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Populus trichocarpaPotri.011G046400.11SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
Nicotiana benthamianaNiben101Scf06588g02010.11Chromodomain-helicase-DNA-binding protein 1-like
Nicotiana benthamianaNiben101Scf02340g08001.10.726Chromodomain-helicase-DNA-binding protein 1-like
Oryza sativaLOC_Os01g57110.21"SNF2 family N-terminal domain containing protein, expressed"

Gene Ontology
GO termDescriptionCategory
GO:0008270zinc ion bindingmolecular_function
GO:0003677DNA bindingmolecular_function
GO:0005524ATP bindingmolecular_function
GO:0004386helicase activitymolecular_function
GO:0005515protein bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00097.21zf-C3HC4107311091.00E-07


Expression pattern
TOP