Detail information of MD10G1340200 Annotation
Gene IDAnnotation
MD10G1340200C2 calcium/lipid-binding and GRAM domain containing protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0441RAD50-interacting protein 1
nuclear pore complex protein Nup98-Nup96
ubiquitin-protein ligase E3 B [EC:2.3.2.26]
HECT
replication factor A1

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD10G1340200mRNAChr104156506541571216+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT1G03370.11C2 calcium/lipid-binding and GRAM domain containing protein
Prunus persicaPrupe.4G002600.4.p1C2 calcium/lipid-binding and GRAM domain containing protein
Prunus persicaPrupe.4G002600.6.p1C2 calcium/lipid-binding and GRAM domain containing protein
Prunus persicaPrupe.4G002600.1.p1C2 calcium/lipid-binding and GRAM domain containing protein
Prunus persicaPrupe.4G002600.3.p0.85C2 calcium/lipid-binding and GRAM domain containing protein
Prunus persicaPrupe.4G002600.5.p0.85C2 calcium/lipid-binding and GRAM domain containing protein
Pyrus communisPCP004382.11-
Pyrus x bretschneideriPbr017578.11-
Rosa multifloraRmu_ssc0000385.1_g000007.11-
Rubus occidentalisRo03_G101491-
Fragaria vescamrna19849.11C2 calcium/lipid-binding and GRAM domain containing protein
Vitis viniferaGSVIVT010034760011C2 calcium/lipid-binding and GRAM domain containing protein
Populus trichocarpaPotri.016G003900.11C2 calcium/lipid-binding and GRAM domain containing protein
Nicotiana benthamianaNiben101Scf17612g01007.11C2 domain-containing protein / GRAM domain-containing protein LENGTH=594
Nicotiana benthamianaNiben101Scf06423g03027.10.771C2 domain-containing protein / GRAM domain-containing protein LENGTH=594
Oryza sativaLOC_Os02g10630.11"GRAM and C2 domains containing protein, putative, expressed"
Oryza sativaLOC_Os06g19400.11"GRAM and C2 domains containing protein, putative, expressed"
Oryza sativaLOC_Os08g38440.11"GRAM and C2 domains containing protein, putative, expressed"
Zea maysGRMZM2G027665_P011-

Gene Ontology
GO termDescriptionCategory
GO:0005515protein bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00168.26C221033.60E-30
PF00168.26C25416422.90E-15
PF02893.16GRAM6947561.90E-16


Expression pattern
TOP