Gene detail

Detail information of MD11G1006700 Annotation

Gene ID	Annotation
MD11G1006700	UDP-Glycosyltransferase superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0364	GPI anchor biosynthetic process proton-transporting V-type ATPase complex assembly positive regulation of G2/M transition of mitotic cell cycle proton-transporting two-sector ATPase complex trans-Golgi network transport vesicle membrane homogalacturonan biosynthetic process negative regulation of photomorphogenesis transferase activity trans-Golgi network endosome polygalacturonate 4-alpha-galacturonosyltransferase activity hydrogen ion transmembrane transporter activity COP9 signalosome

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD11G1006700	mRNA	Chr11	630065	634044	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Carbohydrate-Active enzymes Family	GT4

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT3G45100.2	1	SETH2\|UDP-Glycosyltransferase superfamily protein
Arabidopsis thaliana	AT3G45100.1	1	SETH2\|UDP-Glycosyltransferase superfamily protein
Prunus persica	Prupe.6G004900.1.p	1	UDP-Glycosyltransferase superfamily protein
Pyrus communis	PCP044415.1	1	-
Pyrus x bretschneideri	Pbr003369.1	1	-
Rosa multiflora	Rmu_ssc0000026.1_g000010.1	1	-
Rubus occidentalis	Ro03_G08077	1	-
Fragaria vesca	mrna24819.1	1	UDP-Glycosyltransferase superfamily protein
Vitis vinifera	GSVIVT01024777001	1	UDP-Glycosyltransferase superfamily protein
Solanum lycopersicum	Solyc08g082840.1.1	1	UDP-Glycosyltransferase superfamily protein
Populus trichocarpa	Potri.016G130000.1	1	UDP-Glycosyltransferase superfamily protein
Nicotiana benthamiana	Niben101Scf03552g00004.1	1	Phosphatidylinositol N-acetylglucosaminyltransferase subunit A
Oryza sativa	LOC_Os07g16960.1	1	"glycosyl transferase, group 1 domain containing protein, expressed"
Zea mays	GRMZM2G022310_P01	1	-

Gene Ontology

GO term	Description	Category
GO:0006506	GPI anchor biosynthetic process	biological_process

KEGG

KO	Description	Enzyme
K03857	"phosphatidylinositol glycan, class A"	EC:2.4.1.198

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	2.78174
SRR5252888	dormant buds	no	dormant buds(0 month)	2.15753
SRR5252889	dormant buds	no	dormant buds(0 month)	2.49938
SRR5252886	dormant buds	no	dormant buds(1 months)	3.04523
SRR5252887	dormant buds	no	dormant buds(1 months)	4.1427
SRR5252884	dormant buds	no	dormant buds(2 months)	5.68553
SRR5252882	dormant buds	no	dormant buds(3 months)	4.14711
SRR5252883	dormant buds	no	dormant buds(3 months)	4.40601
SRR5252880	dormant buds	no	dormant buds(4 months)	3.82843
SRR5252881	dormant buds	no	dormant buds(4 months)	2.75637
SRR5252878	bud break	no	bud break	3.81323
SRR5252879	bud break	no	bud break	1.82852
SRR3744766	flower	no	mature	2.46893
SRR3744767	flower	no	mature	2.57665
SRR3744768	flower	no	mature	2.94942
SRR6308190	stigmas	no	open flowers	1.48373
SRR6308181	styles	no	open flowers	2.33982
SRR6308188	filaments	no	open flowers	2.129
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	10.2161
SRR6308192	pollen	no	open flowers	44.9748
SRR6308191	petals	no	open flowers	1.72897
SRR6308194	sepals	no	open flowers	1.76381
SRR6308193	receptacles	no	open flowers	0.914335
SRR6308189	ovaries	no	open flowers	1.14326
SRR3384922	fruit	no	1 week after full bloom	1.98973
SRR3384921	fruit	no	2 week after full bloom	1.78604
SRR3384920	fruit	no	3 week after full bloom	1.89642
SRR3384919	fruit	no	4 week after full bloom	3.16217
SRR3384923	fruit	no	5 week after full bloom	2.03189
SRR3384918	fruit	no	6 week after full bloom	2.62382
SRR3384917	fruit	no	8 week after full bloom	1.17562
SRR3384916	fruit	no	10 week after full bloom	1.48481
SRR3384915	fruit	no	12 week after full bloom	1.30506
SRR3384914	fruit	no	14 week after full bloom	1.16836
SRR3384913	fruit	no	16 week after full bloom	1.43347
SRR3384912	fruit	no	18 week after full bloom	1.93714
SRR3384911	fruit	no	19 week after full bloom	1.54829
SRR3384910	fruit	no	20 week after full bloom	1.25267
SRR768128	whole fruit	no	25 days post anthesis	1.1102
SRR768129	whole fruit	no	35 days post anthesis	0.769999
SRR768130	whole fruit	no	60 days post anthesis	0.537907
SRR768131	whole fruit	no	87 days post anthesis	0.809774
SRR7343308	immature fruit flesh	no	immature	6.01998
SRR7343309	immature fruit flesh	no	immature	4.00441
SRR6320494	ripe fruit flesh	no	mature	1.9212
SRR5405143	ripe fruit peel	no	mature	2.55916
SRR6320572	ripe fruit peel	no	mature	0.95292
SRR7403504	fruit	uninfected	mature	1.13201
SRR7403506	fruit	uninfected	mature	0.968028
SRR7403507	fruit	uninfected	mature	0.845124
SRR7403500	fruit	infected with penicillium expansum	mature	3.06505
SRR7403501	fruit	infected with penicillium expansum	mature	2.17086
SRR7403508	fruit	infected with penicillium expansum	mature	1.86304
SRR7403502	fruit	infected with penicillium expansum	mature	1.61325
SRR7403503	fruit	infected with penicillium expansum	mature	2.44539
SRR7403505	fruit	infected with penicillium expansum	mature	1.96673
SRR1613973	Central seeds	no	20DAPF	1.50709
SRR1613974	Central seeds	no	20DAPF	1.78209
SRR1613975	Central seeds	no	20DAPF	1.48682
SRR1613976	Lateral seeds	no	20DAPF	1.34357
SRR1613977	Lateral seeds	no	20DAPF	1.49305
SRR1613978	Lateral seeds	no	20DAPF	1.47752
SRR3744786	stem	no	mature	2.07222
SRR3744787	stem	no	mature	2.35853
SRR3744772	stem	no	mature	2.1545
SRX765691	seedling shoot apex	no	4-6 week old seedling	2.60517
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.10071
SRR1089478	leaf	Virus-free	plantlets	0.373359
SRR1089477	leaf	ASGV-infected	plantlets	0
SRR767660	leaf	uninfected	fully developed	0.284059
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.369743
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.429965
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.24145
SRR6308182	young leaf	no	immature leaves	3.24896
SRR3744769	leaf	no	mature	1.57173
SRR3744770	leaf	no	mature	1.60541
SRR3744771	leaf	no	mature	1.76942
SRR5405145	leaf	no	mature	1.49505
SRR6320561	leaf	no	mature	1.71323