Gene detail

Detail information of MD11G1129900 Annotation

Gene ID	Annotation
MD11G1129900	Thioesterase superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD11G1129900	mRNA	Chr11	11793922	11795527	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT5G60335.1	1	Thioesterase superfamily protein
Prunus persica	Prupe.6G094800.2.p	1	Thioesterase superfamily protein
Prunus persica	Prupe.6G094800.1.p	1	Thioesterase superfamily protein
Pyrus communis	PCP017044.1	1	-
Pyrus x bretschneideri	Pbr034444.1	1	-
Rosa multiflora	Rmu_sc0000864.1_g000010.1	1	-
Rubus occidentalis	Ro03_G32032	1	-
Vitis vinifera	GSVIVT01025134001	1	Thioesterase superfamily protein
Solanum lycopersicum	Solyc06g075000.2.1	1	Thioesterase superfamily protein
Populus trichocarpa	Potri.006G133800.1	1	Thioesterase superfamily protein
Nicotiana benthamiana	Niben101Scf01911g08011.1	1	(R)-specific enoyl-CoA hydratase
Nicotiana benthamiana	Niben101Scf01890g01016.1	0.856	(R)-specific enoyl-CoA hydratase
Zea mays	GRMZM2G085320_P01	1	-

Gene Ontology

GO term	Description	Category
GO:0008152	metabolic process	biological_process
GO:0016491	oxidoreductase activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01575.15	MaoC_dehydratas	33	126	3.70E-20

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.14477
SRR5252888	dormant buds	no	dormant buds(0 month)	1.28724
SRR5252889	dormant buds	no	dormant buds(0 month)	2.2368
SRR5252886	dormant buds	no	dormant buds(1 months)	0.817591
SRR5252887	dormant buds	no	dormant buds(1 months)	0.434469
SRR5252884	dormant buds	no	dormant buds(2 months)	1.15641
SRR5252882	dormant buds	no	dormant buds(3 months)	1.15982
SRR5252883	dormant buds	no	dormant buds(3 months)	1.01106
SRR5252880	dormant buds	no	dormant buds(4 months)	1.38901
SRR5252881	dormant buds	no	dormant buds(4 months)	2.05566
SRR5252878	bud break	no	bud break	2.30583
SRR5252879	bud break	no	bud break	2.04553
SRR3744766	flower	no	mature	0.744471
SRR3744767	flower	no	mature	0.741925
SRR3744768	flower	no	mature	0.71034
SRR6308190	stigmas	no	open flowers	0.36154
SRR6308181	styles	no	open flowers	0.464925
SRR6308188	filaments	no	open flowers	1.8722
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.480319
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	1.59394
SRR6308194	sepals	no	open flowers	0.579509
SRR6308193	receptacles	no	open flowers	2.00212
SRR6308189	ovaries	no	open flowers	0.750046
SRR3384922	fruit	no	1 week after full bloom	1.84627
SRR3384921	fruit	no	2 week after full bloom	1.88091
SRR3384920	fruit	no	3 week after full bloom	1.96671
SRR3384919	fruit	no	4 week after full bloom	1.72132
SRR3384923	fruit	no	5 week after full bloom	2.63733
SRR3384918	fruit	no	6 week after full bloom	1.6198
SRR3384917	fruit	no	8 week after full bloom	1.90009
SRR3384916	fruit	no	10 week after full bloom	1.61394
SRR3384915	fruit	no	12 week after full bloom	1.34795
SRR3384914	fruit	no	14 week after full bloom	1.63415
SRR3384913	fruit	no	16 week after full bloom	1.02654
SRR3384912	fruit	no	18 week after full bloom	0.481675
SRR3384911	fruit	no	19 week after full bloom	1.27045
SRR3384910	fruit	no	20 week after full bloom	1.17559
SRR768128	whole fruit	no	25 days post anthesis	1.5614
SRR768129	whole fruit	no	35 days post anthesis	1.85754
SRR768130	whole fruit	no	60 days post anthesis	1.19782
SRR768131	whole fruit	no	87 days post anthesis	1.08193
SRR7343308	immature fruit flesh	no	immature	1.92829
SRR7343309	immature fruit flesh	no	immature	1.92671
SRR6320494	ripe fruit flesh	no	mature	1.21592
SRR5405143	ripe fruit peel	no	mature	0.722134
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	1.50256
SRR7403506	fruit	uninfected	mature	0.888849
SRR7403507	fruit	uninfected	mature	1.80918
SRR7403500	fruit	infected with penicillium expansum	mature	0.155337
SRR7403501	fruit	infected with penicillium expansum	mature	0.230517
SRR7403508	fruit	infected with penicillium expansum	mature	0.332356
SRR7403502	fruit	infected with penicillium expansum	mature	0.385439
SRR7403503	fruit	infected with penicillium expansum	mature	0.717507
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	4.40573
SRR1613974	Central seeds	no	20DAPF	5.23621
SRR1613975	Central seeds	no	20DAPF	4.25939
SRR1613976	Lateral seeds	no	20DAPF	3.73886
SRR1613977	Lateral seeds	no	20DAPF	4.39339
SRR1613978	Lateral seeds	no	20DAPF	4.39987
SRR3744786	stem	no	mature	1.68552
SRR3744787	stem	no	mature	0.809531
SRR3744772	stem	no	mature	1.16059
SRX765691	seedling shoot apex	no	4-6 week old seedling	2.20549
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	2.0855
SRR1089478	leaf	Virus-free	plantlets	0.414232
SRR1089477	leaf	ASGV-infected	plantlets	0.803289
SRR767660	leaf	uninfected	fully developed	1.25906
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.65343
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.62905
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.535317
SRR6308182	young leaf	no	immature leaves	2.19742
SRR3744769	leaf	no	mature	0.675919
SRR3744770	leaf	no	mature	0.662377
SRR3744771	leaf	no	mature	0.545398
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0