| Gene ID | Annotation |
|---|---|
| MD11G1145900 | AMP-dependent synthetase and ligase family protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0530 | C2C2-Dof nucleolus elongation factor 1-gamma acetyl-CoA acyltransferase 1 [EC:2.3.1.16] peroxisome eukaryotic translation elongation factor 1 complex 4-coumarate--CoA ligase [EC:6.2.1.12] glycogen synthase kinase 3 beta [EC:2.7.11.26] GSK3/Shaggy Like Protein Kinase Family acetyl-CoA C-acyltransferase activity fatty-acyl-CoA synthase activity glyoxysome organization jasmonic acid biosynthetic process 4-coumarate-CoA ligase activity |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD11G1145900 | mRNA | Chr11 | 13691238 | 13695365 | - |
| CDS: |
| MD11G1145900 |
| Protein: |
| MD11G1145900 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT4G05160.1 | 1 | AMP-dependent synthetase and ligase family protein |
| Prunus persica | Prupe.6G109000.1.p | 1 | AMP-dependent synthetase and ligase family protein |
| Pyrus communis | PCP016499.1 | 1 | - |
| Pyrus x bretschneideri | Pbr030350.1 | 1 | - |
| Rosa multiflora | Rmu_sc0002486.1_g000006.1 | 1 | - |
| Rubus occidentalis | Ro06_G13693 | 1 | - |
| Fragaria vesca | mrna28898.1 | 1 | AMP-dependent synthetase and ligase family protein |
| Vitis vinifera | GSVIVT01033646001 | 1 | AMP-dependent synthetase and ligase family protein |
| Populus trichocarpa | Potri.004G102000.1 | 1 | AMP-dependent synthetase and ligase family protein |
| Populus trichocarpa | Potri.017G112800.1 | 0.68 | AMP-dependent synthetase and ligase family protein |
| Nicotiana benthamiana | Niben101Scf13823g01005.1 | 1 | 2-succinylbenzoate--CoA ligase |
| Oryza sativa | LOC_Os03g05780.1 | 1 | "4-coumarate--CoA ligase-like 7, putative, expressed" |
| GO term | Description | Category |
|---|---|---|
| GO:0003824 | catalytic activity | molecular_function |
| GO:0008152 | metabolic process | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| K01904 | 4-coumarate--CoA ligase | EC:6.2.1.12 |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF13193.2 | AMP-binding_C | 455 | 530 | 2.90E-12 |
 |