Detail information of MD11G1177700 Annotation
Gene IDAnnotation
MD11G1177700Structural maintenance of chromosomes (SMC) family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD11G1177700mRNAChr112127091721286787+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Epigenetic RegulatorsCPC

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT2G27170.21SMC3;TTN7|STRUCTURAL MAINTENANCE OF CHROMOSOMES 3;TITAN7
Arabidopsis thalianaAT2G27170.11SMC3;TTN7|STRUCTURAL MAINTENANCE OF CHROMOSOMES 3;TITAN7
Prunus persicaPrupe.6G149900.1.p1Structural maintenance of chromosomes (SMC) family protein
Prunus persicaPrupe.6G149900.2.p0.851Structural maintenance of chromosomes (SMC) family protein
Pyrus communisPCP007734.11-
Pyrus x bretschneideriPbr029586.11-
Rosa multifloraRmu_sc0017555.1_g000001.11-
Rubus occidentalisRo05_G017241-
Fragaria vescamrna01914.11Structural maintenance of chromosomes (SMC) family protein
Vitis viniferaGSVIVT010331810011Structural maintenance of chromosomes (SMC) family protein
Solanum lycopersicumSolyc06g073780.2.11Structural maintenance of chromosomes (SMC) family protein
Populus trichocarpaPotri.009G155200.11Structural maintenance of chromosomes (SMC) family protein
Nicotiana benthamianaNiben101Scf05588g06007.11Structural maintenance of chromosomes protein 3
Oryza sativaLOC_Os02g04050.11"chromosome segregation protein, putative, expressed"
Zea maysGRMZM2G456570_P011Structural maintenance of chromosomes (SMC) family protein

Gene Ontology
GO termDescriptionCategory
GO:0005694chromosomecellular component
GO:0005524ATP bindingmolecular_function
GO:0051276chromosome organizationbiological_process
GO:0005515protein bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF06470.9SMC_hinge5236331.30E-27


Expression pattern
TOP