| Gene ID | Annotation |
|---|---|
| MD11G1275700 | Ribosomal protein L18ae family |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0225 | cytosol nuclear pore ARF guanyl-nucleotide exchange factor activity regulation of catalytic activity regulation of ARF protein signal transduction protein import into nucleus endocytosis tRNA binding nucleobase-containing compound transmembrane transporter activity plasmodesma vesicle-mediated transport clathrin coat of trans-Golgi network vesicle tRNA export from nucleus positive regulation of organelle organization protein transporter activity clathrin coat of coated pit 1 eukaryotic translation initiation factor 3 complex early endosome exportin-T brefeldin A-inhibited guanine nucleotide-exchange protein vegetative to reproductive phase transition of meristem clathrin heavy chain |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD11G1275700 | mRNA | Chr11 | 39280809 | 39283661 | - |
| CDS: |
| MD11G1275700 |
| Protein: |
| MD11G1275700 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G17080.1 | 1 | Ribosomal protein L18ae family |
| Prunus persica | Prupe.4G152400.1.p | 1 | Ribosomal protein L18ae family |
| Pyrus communis | PCP006358.1 | 1 | - |
| Pyrus x bretschneideri | Pbr009971.1 | 1 | - |
| Rubus occidentalis | Ro03_G15684 | 1 | - |
| Fragaria vesca | mrna31369.1 | 1 | Ribosomal protein L18ae family |
| Solanum lycopersicum | Solyc02g070630.2.1 | 1 | Ribosomal protein L18ae family |
| Populus trichocarpa | Potri.001G380200.1 | 1 | Ribosomal protein L18ae family |
| Nicotiana benthamiana | Niben101Scf08792g00006.1 | 1 | 60S ribosomal protein L18a-like protein |
| Nicotiana benthamiana | Niben101Scf07728g00001.1 | 0.616 | 60S ribosomal protein L18a-like protein |
| Oryza sativa | LOC_Os01g14070.1 | 1 | "60S ribosomal protein L18a-1, putative, expressed" |
| Zea mays | GRMZM2G022453_P01 | 1 | - |
| Zea mays | GRMZM2G021877_P01 | 0.652 | 60S ribosomal protein L18A; |
| GO term | Description | Category |
|---|---|---|
| GO:0003735 | structural constituent of ribosome | molecular_function |
| GO:0005840 | ribosome | cellular component |
| GO:0006412 | translation | biological_process |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
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