Gene ID | Annotation |
---|---|
MD11G1302000 | Homeodomain-like superfamily protein |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0292 | SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C calmodulin-binding transcription activator CHB CAMTA SWI/SNF complex |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD11G1302000 | mRNA | Chr11 | 41760400 | 41767345 | + |
CDS: |
MD11G1302000 |
Protein: |
MD11G1302000 |
Gene family | Subfamily |
---|---|
-- | -- |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Arabidopsis thaliana | AT4G02560.2 | 1 | LD|luminidependens |
Arabidopsis thaliana | AT4G02560.1 | 1 | LD|luminidependens |
Rubus occidentalis | Ro02_G07061 | 1 | - |
Fragaria vesca | mrna24915.1 | 1 | Homeodomain-like superfamily protein |
Vitis vinifera | GSVIVT01010967001 | 1 | Homeodomain-like superfamily protein |
Populus trichocarpa | Potri.T034400.1 | 1 | Homeodomain-like superfamily protein |
Nicotiana benthamiana | Niben101Scf02042g03021.1 | 1 | luminidependens [Arabidopsis thaliana] |
Oryza sativa | LOC_Os01g70810.1 | 1 | "homeobox domain containing protein, expressed" |
Zea mays | GRMZM2G106613_P01 | 1 | Flowering-time protein isoform beta |
GO term | Description | Category |
---|---|---|
GO:0043565 | sequence-specific DNA binding | molecular_function |
GO:0003700 | transcription factor activity, sequence-specific DNA binding | molecular_function |
GO:0005634 | nucleus | cellular component |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
-- | -- | -- | -- | -- |