Detail information of MD12G1049500 Annotation
Gene IDAnnotation
MD12G1049500ribosomal protein 5B

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD12G1049500mRNAChr1256377275640525+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT2G37270.21ATRPS5B;RPS5B|ribosomal protein 5B
Arabidopsis thalianaAT2G37270.11ATRPS5B;RPS5B|ribosomal protein 5B
Arabidopsis thalianaAT3G11940.10.659AML1;ATRPS5A;RPS5A|ARABIDOPSIS MINUTE-LIKE 1;ribosomal protein 5A
Arabidopsis thalianaAT3G11940.20.659AML1;ATRPS5A;RPS5A|ARABIDOPSIS MINUTE-LIKE 1;ribosomal protein 5A
Pyrus communisPCP039652.11-
Pyrus x bretschneideriPbr023698.11-
Rosa multifloraRmu_sc0005991.1_g000014.11-
Rubus occidentalisRo06_G229191-
Rubus occidentalisRo02_G350261-
Fragaria vescamrna18014.11ribosomal protein 5B
Vitis viniferaGSVIVT010263280011ribosomal protein 5B
Vitis viniferaGSVIVT010334190011ribosomal protein 5B
Populus trichocarpaPotri.006G197700.11ribosomal protein 5B
Populus trichocarpaPotri.016G063200.21ribosomal protein 5B
Nicotiana benthamianaNiben101Scf04288g01012.1130S ribosomal protein S7
Nicotiana benthamianaNiben101Scf00749g04008.10.96930S ribosomal protein S7
Oryza sativaLOC_Os01g01060.11"40S ribosomal protein S5, putative, expressed"
Oryza sativaLOC_Os04g16798.11"chloroplast 30S ribosomal protein S7, putative, expressed"
Oryza sativaLOC_Os04g16886.11"chloroplast 30S ribosomal protein S7, putative"
Oryza sativaLOC_Os04g16712.11"chloroplast 30S ribosomal protein S7, putative"
Oryza sativaLOC_Os04g16856.11"chloroplast 30S ribosomal protein S7, putative"
Oryza sativaLOC_Os08g15246.11"chloroplast 30S ribosomal protein S7, putative"
Oryza sativaLOC_Os07g25002.11"chloroplast 30S ribosomal protein S7, putative, expressed"
Oryza sativaLOC_Os10g21372.11"chloroplast 30S ribosomal protein S7, putative"
Zea maysGRMZM2G078985_P01140S ribosomal protein S5;

Gene Ontology
GO termDescriptionCategory
GO:0015935small ribosomal subunitcellular component
GO:0003735structural constituent of ribosomemolecular_function
GO:0003723RNA bindingmolecular_function
GO:0006412translationbiological_process

KEGG
KODescriptionEnzyme
K02989small subunit ribosomal protein S5e-

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00177.17Ribosomal_S7632085.70E-37


Expression pattern
TOP