Detail information of MD12G1082900 Annotation
Gene IDAnnotation
MD12G1082900Calcium-binding EF-hand family protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD12G1082900mRNAChr121007263610075256+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT3G10300.31Calcium-binding EF-hand family protein
Arabidopsis thalianaAT3G10300.20.725Calcium-binding EF-hand family protein
Arabidopsis thalianaAT3G10300.40.725Calcium-binding EF-hand family protein
Arabidopsis thalianaAT3G10300.50.707Calcium-binding EF-hand family protein
Pyrus communisPCP018606.11-
Pyrus x bretschneideriPbr002059.11-
Rubus occidentalisRo06_G234011-
Fragaria vescamrna21970.11Calcium-binding EF-hand family protein
Solanum lycopersicumSolyc10g079890.1.11Calcium-binding EF-hand family protein
Populus trichocarpaPotri.016G043600.11Calcium-binding EF-hand family protein
Populus trichocarpaPotri.006G047300.11Calcium-binding EF-hand family protein
Nicotiana benthamianaNiben101Scf01578g04001.11Calcium-binding EF-hand family protein LENGTH=354
Nicotiana benthamianaNiben101Scf00492g04001.10.795Calcium-binding protein 4
Oryza sativaLOC_Os12g04240.10.823"peflin, putative, expressed"
Oryza sativaLOC_Os11g04480.11"peflin, putative, expressed"
Zea maysGRMZM2G357595_P011-

Gene Ontology
GO termDescriptionCategory
GO:0005509calcium ion bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF13202.2EF-hand_51701900.00073
PF13405.2EF-hand_62352621.50E-06


Expression pattern
TOP