| Gene ID | Annotation |
|---|---|
| MD12G1183600 | HEAT repeat |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0325 | clathrin binding AP-4 complex subunit epsilon-1 U6 snRNA-associated Sm-like protein LSm7 protein N-linked glycosylation intracellular protein transport miRNA mediated inhibition of translation endosome organization lytic vacuole organization protein storage vacuole organization |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD12G1183600 | mRNA | Chr12 | 26367345 | 26378184 | - |
| CDS: |
| MD12G1183600 |
| Protein: |
| MD12G1183600 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Prunus persica | Prupe.6G288100.1.p | 1 | "HEAT repeat ;WD domain, G-beta repeat protein protein" |
| Pyrus communis | PCP028283.1 | 1 | - |
| Rosa multiflora | Rmu_ssc0000326.1_g000006.1 | 1 | - |
| Rubus occidentalis | Ro06_G05676 | 1 | - |
| Fragaria vesca | mrna13815.1 | 1 | "HEAT repeat ;WD domain, G-beta repeat protein protein" |
| Vitis vinifera | GSVIVT01030232001 | 1 | "HEAT repeat ;WD domain, G-beta repeat protein protein" |
| Populus trichocarpa | Potri.006G106600.1 | 1 | "HEAT repeat ;WD domain, G-beta repeat protein protein" |
| Nicotiana benthamiana | Niben101Scf09248g01002.1 | 1 | Regulatory-associated protein of TOR 1 |
| Nicotiana benthamiana | Niben101Scf12202g00015.1 | 0.887 | Regulatory-associated protein of TOR 1 |
| Oryza sativa | LOC_Os11g01872.1 | 0.617 | "HEAT repeat family protein, putative, expressed" |
| Oryza sativa | LOC_Os12g01922.1 | 1 | "WD domain and HEAT domain containing protein, putative, expressed" |
| Zea mays | GRMZM2G048067_P01 | 1 | - |
| GO term | Description | Category |
|---|---|---|
| GO:0031931 | TORC1 complex | cellular component |
| GO:0031929 | TOR signaling | biological_process |
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF14538.2 | Raptor_N | 100 | 251 | 2.50E-68 |
 |