Detail information of MD12G1212400 Annotation
Gene IDAnnotation
MD12G1212400RING/U-box superfamily protein

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD12G1212400mRNAChr122913667529142390-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
Ubiquitin FamilyRING

Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT3G05545.11RING/U-box superfamily protein
Rosa multifloraRmu_ssc0000046.1_g000008.11-
Fragaria vescamrna22200.11RING/U-box superfamily protein
Vitis viniferaGSVIVT010311340011RING/U-box superfamily protein
Solanum lycopersicumSolyc01g099790.2.11RING/U-box superfamily protein
Populus trichocarpaPotri.013G015600.11RING/U-box superfamily protein
Nicotiana benthamianaNiben101Scf00369g11013.11RING finger containing E3 ubiquitin-protein ligase WSV222
Oryza sativaLOC_Os05g06270.21"zinc finger, C3HC4 type domain containing protein, expressed"
Oryza sativaLOC_Os01g24880.21"zinc finger, C3HC4 type domain containing protein, expressed"
Oryza sativaLOC_Os08g42640.11"zinc finger, C3HC4 type domain containing protein, expressed"
Zea maysGRMZM2G153250_P011Putative RING zinc finger domain superfamily protein;

Gene Ontology
GO termDescriptionCategory
GO:0008270zinc ion bindingmolecular_function
GO:0005515protein bindingmolecular_function

KEGG
KODescriptionEnzyme
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Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF13639.2zf-RING_233791.30E-08


Expression pattern
TOP