| Gene ID | Annotation |
|---|---|
| MD12G1233700 | Transducin/WD40 repeat-like superfamily protein |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0221 | cullin 1 condensed nuclear chromosome SCF complex assembly Cullin spindle ubiquitin ligase complex phragmoplast protein import into peroxisome matrix fatty acid beta-oxidation regulation of circadian rhythm lateral root formation phloem or xylem histogenesis regulation of cell cycle process embryonic pattern specification regulation of cell differentiation 3-dehydrosphinganine reductase [EC:1.1.1.102] primary shoot apical meristem specification pre-mRNA branch site protein p14 nucleotide binding 3-dehydrosphinganine reductase activity ubiquitin protein ligase binding cell division cotyledon development Cul4-RING E3 ubiquitin ligase complex serine/threonine-protein phosphatase 2A regulatory subunit B'' leaf development protein N-linked glycosylation amino acid import RNA processing protein glycosylation ER to Golgi vesicle-mediated transport mitotic cell cycle sphingolipid biosynthetic process sister chromatid cohesion seed dormancy process serine/threonine-protein phosphatase 2A regulatory subunit B' |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD12G1233700 | mRNA | Chr12 | 30939401 | 30947428 | - |
| CDS: |
| MD12G1233700 |
| Protein: |
| MD12G1233700 |
| Gene family | Subfamily |
|---|---|
| Ubiquitin Family | DWD |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Pyrus communis | PCP024408.1 | 1 | - |
| Pyrus x bretschneideri | Pbr004413.1 | 1 | - |
| Rosa multiflora | Rmu_sc0000608.1_g000022.1 | 1 | - |
| Rubus occidentalis | Ro06_G08187 | 1 | - |
| Fragaria vesca | mrna16448.1 | 1 | Transducin/WD40 repeat-like superfamily protein |
| Vitis vinifera | GSVIVT01021896001 | 1 | Transducin/WD40 repeat-like superfamily protein |
| Solanum lycopersicum | Solyc01g098090.2.1 | 1 | Transducin/WD40 repeat-like superfamily protein |
| Populus trichocarpa | Potri.013G033800.1 | 1 | Transducin/WD40 repeat-like superfamily protein |
| Nicotiana benthamiana | Niben101Scf09234g02008.1 | 1 | WD repeat-containing protein 86 |
| Zea mays | GRMZM2G167999_P01 | 1 | Transducin/WD40 repeat-like superfamily protein |
| GO term | Description | Category |
|---|---|---|
| GO:0005515 | protein binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| -- | -- | -- |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |