Gene ID | Annotation |
---|---|
MD13G1063400 | Tetratricopeptide repeat (TPR)-like superfamily protein |
Network Category | Global Network | Conditional network (different tissues and developmental stages) |
---|---|---|
Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
Method | Module ID | Function Annotation |
---|---|---|
Co-expression network | CFinderM0689 | translation initiation factor 5 histidinol-phosphate aminotransferase [EC:2.6.1.9] pyridoxine kinase [EC:2.7.1.35] GT32 histidinol-phosphate transaminase activity pyridoxal kinase activity pyridoxal 5'-phosphate salvage |
more details in UCSC | details of chromatin state |
Gene | Type | Chr | Start | End | Strand |
---|---|---|---|---|---|
MD13G1063400 | mRNA | Chr13 | 4390064 | 4393421 | + |
CDS: |
MD13G1063400 |
Protein: |
MD13G1063400 |
Gene family | Subfamily |
---|---|
-- | -- |
Species | Gene ID | Score of Inparanoid | Annotation |
---|---|---|---|
Arabidopsis thaliana | AT1G26460.1 | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
Prunus persica | Prupe.1G286100.1.p | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
Pyrus communis | PCP013082.1 | 1 | - |
Pyrus communis | PCP025981.1 | 1 | - |
Pyrus x bretschneideri | Pbr029961.1 | 1 | - |
Rosa multiflora | Rmu_sc0004398.1_g000003.1 | 1 | - |
Rosa multiflora | Rmu_sc0002327.1_g000019.1 | 1 | - |
Rubus occidentalis | Ro04_G36187 | 1 | - |
Vitis vinifera | GSVIVT01012211001 | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
Solanum lycopersicum | Solyc05g012390.2.1 | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
Populus trichocarpa | Potri.010G159100.1 | 1 | Tetratricopeptide repeat (TPR)-like superfamily protein |
Nicotiana benthamiana | Niben101Scf03027g01002.1 | 1 | Pentatricopeptide repeat-containing protein |
Nicotiana benthamiana | Niben101Scf00635g08008.1 | 0.933 | Pentatricopeptide repeat-containing protein |
Oryza sativa | LOC_Os07g40800.1 | 1 | "PPR repeat domain containing protein, putative, expressed" |
Zea mays | GRMZM2G044023_P01 | 1 | - |
GO term | Description | Category |
---|---|---|
-- | -- | -- |
KO | Description | Enzyme |
---|---|---|
-- | -- | -- |
Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
---|---|---|---|---|
-- | -- | -- | -- | -- |