Detail information of MD13G1210400 Annotation
Gene IDAnnotation
MD13G12104003-hydroxyacyl-CoA dehydratase 1

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
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Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD13G1210400mRNAChr131958433519585051+

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT4G14430.11"ATECI2;ECHIB;ECI2;IBR10;PEC12|ARABIDOPSIS THALIANA DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 2;ENOYL-COA HYDRATASE/ISOMERASE B;DELTA(3), DELTA(2)-ENOYL COA ISOMERASE 2;indole-3-butyric acid response 10;"
Prunus persicaPrupe.1G034900.1.p13-hydroxyacyl-CoA dehydratase 1
Pyrus communisPCP012377.11-
Pyrus x bretschneideriPbr023067.11-
Rosa multifloraRmu_sc0007693.1_g000007.11-
Rosa multifloraRmu_sc0000383.1_g000017.11-
Rubus occidentalisRo04_G124521-
Fragaria vescamrna01771.113-hydroxyacyl-CoA dehydratase 1
Solanum lycopersicumSolyc06g053670.1.113-hydroxyacyl-CoA dehydratase 1
Populus trichocarpaPotri.010G073700.113-hydroxyacyl-CoA dehydratase 1
Nicotiana benthamianaNiben101Scf02929g06127.11enoyl-CoA hydratase [Streptomyces sp. NRRL F-5527]
Nicotiana benthamianaNiben101Scf11064g00002.10.892enoyl-CoA hydratase [Streptomyces sp. NRRL F-5527]
Oryza sativaLOC_Os05g45300.11"enoyl-CoA hydratase/isomerase family protein, putative, expressed"
Oryza sativaLOC_Os11g16960.11"carnitine racemase like protein, putative, expressed"
Oryza sativaLOC_Os11g17580.11enoyl-CoA hydratase/isomerase family protein
Zea maysGRMZM2G101457_P011Carnitine racemase/ catalytic

Gene Ontology
GO termDescriptionCategory
GO:0003824catalytic activitymolecular_function
GO:0008152metabolic processbiological_process

KEGG
KODescriptionEnzyme
K18880very-long-chain (3R)-3-hydroxyacyl-CoA dehydrataseEC:4.2.1.134

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.16ECH_1272042.60E-19


Expression pattern
TOP