Detail information of MD14G1018800 Annotation
Gene IDAnnotation
MD14G101880060S acidic ribosomal protein family

Network
Network CategoryGlobal NetworkConditional network
(different tissues and developmental stages)
Coexpression PositiveTop300 PCC genelistTop300 PCC genelist
Coexpression NegativeTop300 PCC genelistTop300 PCC genelist

Functional module
MethodModule IDFunction Annotation
Co-expression networkCFinderM0750ubiquitin-protein ligase E3 C [EC:2.3.2.26]
HECT
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
structural constituent of ribosome
ubiquitin ligase complex
small subunit ribosomal protein S16e
large subunit ribosomal protein LP2
large subunit ribosomal protein L27e
ubiquitin-protein transferase activity
RNA methylation
translation

Gene structure and chromatin state
more details in UCSCdetails of chromatin state

Location
GeneTypeChrStartEndStrand
MD14G1018800mRNAChr1417641311766053-

Sequences
CDS:
Protein:

Gene family
Gene familySubfamily
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Orthologous genes
SpeciesGene IDScore of InparanoidAnnotation
Arabidopsis thalianaAT2G27720.1160S acidic ribosomal protein family
Arabidopsis thalianaAT2G27710.2160S acidic ribosomal protein family
Arabidopsis thalianaAT2G27710.3160S acidic ribosomal protein family
Arabidopsis thalianaAT2G27710.1160S acidic ribosomal protein family
Arabidopsis thalianaAT2G27720.30.8360S acidic ribosomal protein family
Arabidopsis thalianaAT2G27720.20.77460S acidic ribosomal protein family
Pyrus communisPCP002734.11-
Rosa multifloraRmu_sc0003510.1_g000027.11-
Rosa multifloraRmu_sc0011581.1_g000006.11-
Rubus occidentalisRo06_G118551-
Vitis viniferaGSVIVT01031366001160S acidic ribosomal protein family
Solanum lycopersicumSolyc11g067100.1.1160S acidic ribosomal protein family
Populus trichocarpaPotri.009G146200.1160S acidic ribosomal protein family
Populus trichocarpaPotri.004G185800.10.74460S acidic ribosomal protein family
Nicotiana benthamianaNiben101Scf11937g02001.1160S acidic ribosomal protein P2
Nicotiana benthamianaNiben101Scf05610g03019.1160S acidic ribosomal protein P2
Nicotiana benthamianaNiben101Scf02582g00003.10.90760S acidic ribosomal protein P2
Nicotiana benthamianaNiben101Scf06081g02016.10.73960S acidic ribosomal protein P2
Nicotiana benthamianaNiben101Scf01250g02002.10.67460S acidic ribosomal protein P2
Oryza sativaLOC_Os08g15180.11"60S acidic ribosomal protein, putative"
Oryza sativaLOC_Os05g37330.11"60S acidic ribosomal protein, putative, expressed"
Zea maysGRMZM2G010257_P01160S acidic ribosomal protein P2A;
Zea maysGRMZM2G102891_P010.75-
Zea maysGRMZM2G119809_P010.733protein_coding
Zea maysGRMZM2G075630_P010.68360S acidic ribosomal protein P2A; Acidic ribosomal protein P2a-4;
Zea maysGRMZM2G105712_P010.68360S acidic ribosomal protein P2A; Acidic ribosomal protein P2a-4 isoform 1; Acidic ribosomal protein P2a-4 isoform 2; Acidic ribosomal protein P2a-4 isoform 3; Acidic ribosomal protein P2a-4 isoform 4;

Gene Ontology
GO termDescriptionCategory
GO:0003735structural constituent of ribosomemolecular_function
GO:0005840ribosomecellular component
GO:0006414translational elongationbiological_process

KEGG
KODescriptionEnzyme
K02943large subunit ribosomal protein LP2-

Pfam domain
Pfam accessionPfam nameAlignment startAlignment endE-value
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Expression pattern
TOP