Gene detail

Detail information of MD14G1025800 Annotation

Gene ID	Annotation
MD14G1025800	Protein with RNI-like/FBD-like domains

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0088	extracellular region aspartic-type endopeptidase activity regulation of double fertilization forming a zygote and endosperm proteolysis

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD14G1025800	mRNA	Chr14	2353185	2355199	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus x bretschneideri	Pbr007619.1	1	-
Fragaria vesca	mrna22667.1	1	F-box/RNI-like/FBD-like domains-containing protein

Gene Ontology

GO term	Description	Category
GO:0005515	protein binding	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0
SRR5252888	dormant buds	no	dormant buds(0 month)	0.141445
SRR5252889	dormant buds	no	dormant buds(0 month)	0.873901
SRR5252886	dormant buds	no	dormant buds(1 months)	0.23957
SRR5252887	dormant buds	no	dormant buds(1 months)	1.14577
SRR5252884	dormant buds	no	dormant buds(2 months)	0.609934
SRR5252882	dormant buds	no	dormant buds(3 months)	0.305865
SRR5252883	dormant buds	no	dormant buds(3 months)	0.722133
SRR5252880	dormant buds	no	dormant buds(4 months)	1.22102
SRR5252881	dormant buds	no	dormant buds(4 months)	0.734112
SRR5252878	bud break	no	bud break	0.405392
SRR5252879	bud break	no	bud break	1.46099
SRR3744766	flower	no	mature	0.191616
SRR3744767	flower	no	mature	0.09312
SRR3744768	flower	no	mature	0.243126
SRR6308190	stigmas	no	open flowers	1.21622
SRR6308181	styles	no	open flowers	0.139495
SRR6308188	filaments	no	open flowers	0.209412
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.324178
SRR6308192	pollen	no	open flowers	1.8432
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0.968591
SRR6308189	ovaries	no	open flowers	0.112461
SRR3384922	fruit	no	1 week after full bloom	0.668128
SRR3384921	fruit	no	2 week after full bloom	0.361604
SRR3384920	fruit	no	3 week after full bloom	0.136456
SRR3384919	fruit	no	4 week after full bloom	0.168087
SRR3384923	fruit	no	5 week after full bloom	0.199812
SRR3384918	fruit	no	6 week after full bloom	0.266919
SRR3384917	fruit	no	8 week after full bloom	0.064227
SRR3384916	fruit	no	10 week after full bloom	0.250308
SRR3384915	fruit	no	12 week after full bloom	0.0493604
SRR3384914	fruit	no	14 week after full bloom	0
SRR3384913	fruit	no	16 week after full bloom	0.112772
SRR3384912	fruit	no	18 week after full bloom	0.0529152
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0.0397373
SRR768128	whole fruit	no	25 days post anthesis	0.976894
SRR768129	whole fruit	no	35 days post anthesis	0.694148
SRR768130	whole fruit	no	60 days post anthesis	1.058
SRR768131	whole fruit	no	87 days post anthesis	0.477821
SRR7343308	immature fruit flesh	no	immature	0.845683
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	7.59633
SRR1613974	Central seeds	no	20DAPF	7.4709
SRR1613975	Central seeds	no	20DAPF	7.13859
SRR1613976	Lateral seeds	no	20DAPF	6.50209
SRR1613977	Lateral seeds	no	20DAPF	4.7135
SRR1613978	Lateral seeds	no	20DAPF	5.10459
SRR3744786	stem	no	mature	0.109523
SRR3744787	stem	no	mature	0.108344
SRR3744772	stem	no	mature	0.129672
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.529562
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.01468
SRR1089478	leaf	Virus-free	plantlets	0.183598
SRR1089477	leaf	ASGV-infected	plantlets	0.0712076
SRR767660	leaf	uninfected	fully developed	0
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.363676
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0
SRR6308182	young leaf	no	immature leaves	0.348648
SRR3744769	leaf	no	mature	0.0447884
SRR3744770	leaf	no	mature	0.0471082
SRR3744771	leaf	no	mature	0.139141
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0