Gene detail

Detail information of MD14G1085100 Annotation

Gene ID	Annotation
MD14G1085100	P-loop containing nucleoside triphosphate hydrolases superfamily protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0475	NFF cell proliferation histone H3-K9 methylation DNA methylation epsilon DNA polymerase complex CAF-1 complex DNA polymerase epsilon subunit 1 [EC:2.7.7.7] DNA replication licensing factor MCM2 [EC:3.6.4.12] DMT DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37] centromeric protein E nuclear chromatin DNA replication initiation C-5 methylation of cytosine DNA methylation on cytosine within a CG sequence

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD14G1085100	mRNA	Chr14	10331090	10346039	-

Sequences

CDS:

MD14G1085100

CACTTCCAAAGCACACAGAGGCGGGAAAAAAAGCCAGAGCACCCAAAAGCAAAACCCAAATGAGCATTTGAAAACCGCCATAATTGCAGCAAACCGCCACCTAATTCTGCAGAGCCAGAGAGAATGGAGAGAATTCACGTCACTGTGCGTGCTCGGCCGCTCTCAGCCGAAGACGCCAAGACCAGCCCTTGGCGCATCTCCGGCAACTCCATCGCCATCCCCAACTACTCCAAGTTCGAATTCGATCGAATTTTCGGTGAAGATTGTAAGACCTTCGAGGTCTATGAATCAAAAACCAAAGATATAGTCGCCGCCGCGGTTCGCGGCTTCAATGGAACCGTGTTTGCATATGGGCAAACTAACAGTGGGAAAACTCACACCATTCGAGGCTCGGCTACTGAACCGGGGGTGATTCCTCTTGCAGTGCGCGATATGTTCGACATTATTCAAGAGGATGTGGACCGGGAATTCCTATTACGAATGTCTTATATGGAGATCTATAATGAGGACATAAATGATTTGTTGGCTCCTGAGCATCGAAAGTTGCAAATTCATGAAAGTCTAGAGCGAGGGATATATGTTGCTGGATTGCGAGAAGAAATTGTTGCCTCTCCAGAGCAAGTCCTTGATCTCATGGAGTTTGGAGAGTCTCATCGGCATATCGGAGAGACAAATATGAATCTGTACAGTAGTAGGTCCCACACTATTTTCCGCATGATAATTGAAAGCCGAGATAAACATGAAGGTGAAGATATTGCTAATTCTTGTGATGCGGTCCGTGTTTCAGTTCTGAATTTAGTGGACCTAGCTGGTTCAGAACGTGCTGCAAAAACTGGTGCAGAAGGTGTTCGGCTCAAAGAGGGTTCCCATATCAATAAAAGCCTTATGACTTTGGGAACTGTCATTAAAAAACTGAGTGAAGGTGCTGAGAGTCAAGGGGGACATGTCCCATATCGAGATAGCAAACTTACGCGCATATTGCAACCTGCTTTGGGTGGAAATGCAAACACAGCTATAATATGCAACATCACTCTTGCACAAATTCATGCAGATGAGACTAAAAGCAGTCTCCAATTTGCAAGTAGAGCATTACGTGTCACGAATTGTGCTCATGTCAATGAGATTCTAACAGATGCTGCTCTTCTCAAGCGTCAAAAGAAAGAAATTGAGGAGCTTCGAGCGAAATTGCAGGAATCTCATTCAGAACATTGGGCAGAGGAAATCCTCAATCTGCGAAATACGTTATTGCAGACTGAGTTAGAGAGGGAGCGTATAGCTTTGGAGTTGGAGGAGGAAAAGAAAGCCCAAGCAGAAAGAGAGAAGATGGTGCAACAACAAGCTAAGAAAATTGAGAACCTGAGTTCAATGGTGTTGTATTCAAATAGAGATGAGAATCGCGACCGCTTGAAAAAGGAGAAGAGGCGTGATACTTGGTGTCCAGGTAAACTTGCAAGGGAGACTTTGGGAGAGGTGCCATCCACCATCCAGTCAAAGGCATCTGCTGCAAAACCTATGAGACTGAAGCGTGACATCGGACCACTTCTTCCTTTTGAAGAACTGGTGCATGAGATTGAAGTTTCTGAGAATGAGTCTTGCAAAGAAGACGAAGAAAGTAATTGTATCACGTTGGAGGACCGTGCTCTTCCTGATCCATGTGCTTTGTTACATGTTACTAATAGGAGAAAAGTGCCACCCAGGACGAAAAGCTTACCCTTGGACAATGAATTAGGAGATCTGCAAGCAGAATACGAAGATTTGCTTATCAAATATGAAACTCAGATACAAATTGATTGCTTGACACGGAAGCTCGCTGAGGCTGATATGTTATCTGGAGCAATGTATAATGATTACTCCAAGTCTTTCCTCAATAAAGGTACCATTAATGGGGACAATAACGGTAGTTTAAGAGAGCCAGAGGTTATTCTTGTGATTAAGCGACTTCAAGAACAGATTAAGATGCTTGAAACAGAGAAGTCTTCAAGCCAGCAAAATCTGGATAGTGTAGTTGAGCTGGCAACTGAGCAAAACATTTGTGCCCGGGAGAAGTTTGACGAGCTCTATGAAGAGCTTCAAGTTGCACGTGAGGAGGCCAGGGTAGCTCGTGATCAACGTACTTGGAACGAATCTGTAACAAAAGTTGATGATGGAAGTTCTGACTTTGTGATCGAGCTTGCAAAGGGGGTCCAAGAAATAATATTGGAAGTTCAAAGCTCAGAAATAGCAATTGAAAGTGTATCTTCAGTTTTGGATGAGGTCTCTAAGAGTTTCTCTGTGCTATTCGATACATTCCTAGATTTCAAGTCTTTAATGTGTGAATTCTCCTTGAAACAAAAAACAATTATCAGTGACCATGAGAAGTTAAACTCTTACATGATGCAGAAAGTTTCTGGACTTGAGACTGAAAAGTTCCTTTTGTACAATCAATCAGTTGATCTTCAGAACCAGATAGAAGAACTGAAACTGCAGACTCAAAATTCCGAACAGTCTTTGAGGGAAATGTTGGAACAACAGGATTTGGAAAAGGGAGAATATATTTCTCATATACAAGTCCTTGAAAAAGAAATATCAGGTTTATCATCTTGTTCTTTGGCCAAGGAAAAGGAAAATCTGCGCAAAGATGTTGAAAAAACAAGAATGAAGTTGAAAGAGACAGAGTGTAAGCTGAAGAATGCCATACAAGAGAAAACCAAACTGGAGGGTGAAAAAGCATCTGCTGAACGAGAAATAAAACGATTGCAGAGTCAGAACTCTCTTCTTGAACGTGACATGAACAAACGTGAGTCACTTGCTGGTAGAAGGCGTGATTCAGTTAATGATAAGGGTTTGAAGACATCGGATCCTAAAAGAGCAAAAAACCTTGCCTTCGAACAGACATTGCAGGAAGAATACAAAAAGATGGAAGTTTATGCTTTTGAAACGGAGACAAAGATTAATTCTCTAGAAGAAGAGTTATCAGCTGTATACAGGGAAAAAGAAGACGCTATGTCCACCAATGATGCTTTAGCATCTGAATTAGAAAACCTGTCTGAAAAACTGAGCACATCAAACTTGGAACTGGAAGCTTTGCAGGAAGAGCTTTTGGCCCTGCAGAGGTTAGAAGAATCTACATTTGAGCAGCAAAAGATGGAAGGTTCCATTAAAATGTTCACTGAAGAAAAGGAAGACTTGGCGATGCAACTTACAGATTCCCTTTTGGAAATGGAGGAGGAAAGAGCAATATGGTCAGCTAAGGAGAAGGCTTCCATTGAAGCAATGGAAGAGAAATCAAAGTTATACAACATGGAGATTACATCATTAACAAGGGAAATATCTGAGGTGAGGAATGAGTTGGACTCTTGTAGACAAGAGTGCAAGGTCCTAAGGGAAAGTTTAACTTGTTGCGAGGAAACAGCTGGACAGAAGACATTCAGCGTGGAGAAGCCTTTGGGGATTGATCAACTGAATAGTGGTGAGAGTATAGATGATATTCTGAGCAAAGAGTCTCAAGAATTGTTGAGCTCAAACTTGGGGACGTGCGGAATTAATGATTATGAGGAGGTGAATGTGCTTCGGAAGGAGCTCAGTTGTCTGAGTAAAGAAAGAGAAGGCTTGTTGATTCAAATAAAAGAGTTATCCGAACTTTCAAATGACCACCAGAGTCTCAACAACCAGCTCCATGTTTTGACAATTGAAAGGGATAATCTAGTGACTCAGATACAAGAGCACCAGAAACTTGCAATTGAAGAAGAAAGTCTTAATAAACGTTATAATGATTTGTTGTTGGAGGCAAAGTTTCAAGTCGAGGAACTGAAAAGGAGAATATCAAGCATGGAGTTAAAGACTCACAAAGATCAAGTTGAAAGCAGCATAGACAAAGCAAAGCTCCGAATGAGGCTTCGAGGGGCACAAGCAAAGTTAGATGCCTTCCGAAGTAGATACAAGGACGCTCTAGACGAGTCCAATCACATGAACAGGAAGTATGAGGAGGCTACAGTCAAGCTAAAGGACCTGTTAGCTTCAAAAGGAGTAGAGGTCCTCGGCCTTAAGAAGCAGCTTGCTGCTGCAAAGAGTGGTCATGAACAAAAATAAATCCATAAGTTGCTTATGATTATATTAGAGATTGATTTATCATTAGCCAGTGCCTCTTGTGTGCTGTTTAATGAACATCTAGTTACTATTTAATGAATGTAATATTAGATTTATCATTAACAAGTGCTTATTAGGGCTGGTTTGGTATTGCTGTGCTTTGAAAAAAAGCTGCTGT

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT3G10180.1	1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persica	Prupe.7G041000.1.p	1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persica	Prupe.7G041000.3.p	0.955	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Prunus persica	Prupe.7G041000.2.p	0.9	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Pyrus communis	PCP017435.1	1	-
Pyrus x bretschneideri	Pbr030537.1	1	-
Rosa multiflora	Rmu_sc0001449.1_g000013.1	1	-
Rubus occidentalis	Ro06_G22667	1	-
Fragaria vesca	mrna14306.1	1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Vitis vinifera	GSVIVT01033614001	1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Populus trichocarpa	Potri.006G040700.1	1	P-loop containing nucleoside triphosphate hydrolases superfamily protein
Nicotiana benthamiana	Niben101Scf01274g03017.1	1	Kinesin-related protein 5

Gene Ontology

GO term	Description	Category
GO:0005871	kinesin complex	cellular component
GO:0005524	ATP binding	molecular_function
GO:0008017	microtubule binding	molecular_function
GO:0007018	microtubule-based movement	biological_process
GO:0003777	microtubule motor activity	molecular_function

KEGG

KO	Description	Enzyme
K11498	centromeric protein E	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00225.19	Kinesin	34	323	1.40E-103

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	1.50592
SRR5252888	dormant buds	no	dormant buds(0 month)	0.659242
SRR5252889	dormant buds	no	dormant buds(0 month)	0.869765
SRR5252886	dormant buds	no	dormant buds(1 months)	2.00054
SRR5252887	dormant buds	no	dormant buds(1 months)	1.53283
SRR5252884	dormant buds	no	dormant buds(2 months)	2.13207
SRR5252882	dormant buds	no	dormant buds(3 months)	1.86115
SRR5252883	dormant buds	no	dormant buds(3 months)	1.48867
SRR5252880	dormant buds	no	dormant buds(4 months)	2.88497
SRR5252881	dormant buds	no	dormant buds(4 months)	2.71967
SRR5252878	bud break	no	bud break	8.18755
SRR5252879	bud break	no	bud break	10.3231
SRR3744766	flower	no	mature	0.392404
SRR3744767	flower	no	mature	0.349562
SRR3744768	flower	no	mature	0.398819
SRR6308190	stigmas	no	open flowers	0.254435
SRR6308181	styles	no	open flowers	0.465878
SRR6308188	filaments	no	open flowers	0.246123
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.806598
SRR6308192	pollen	no	open flowers	3.12584
SRR6308191	petals	no	open flowers	1.01905
SRR6308194	sepals	no	open flowers	0.408582
SRR6308193	receptacles	no	open flowers	0.7876
SRR6308189	ovaries	no	open flowers	0.706804
SRR3384922	fruit	no	1 week after full bloom	1.01935
SRR3384921	fruit	no	2 week after full bloom	1.04319
SRR3384920	fruit	no	3 week after full bloom	0.812564
SRR3384919	fruit	no	4 week after full bloom	0.620134
SRR3384923	fruit	no	5 week after full bloom	0.248313
SRR3384918	fruit	no	6 week after full bloom	0.24187
SRR3384917	fruit	no	8 week after full bloom	0.149656
SRR3384916	fruit	no	10 week after full bloom	0.113409
SRR3384915	fruit	no	12 week after full bloom	0.134185
SRR3384914	fruit	no	14 week after full bloom	0.223097
SRR3384913	fruit	no	16 week after full bloom	0.153283
SRR3384912	fruit	no	18 week after full bloom	0.143848
SRR3384911	fruit	no	19 week after full bloom	0.236516
SRR3384910	fruit	no	20 week after full bloom	0.108025
SRR768128	whole fruit	no	25 days post anthesis	1.87912
SRR768129	whole fruit	no	35 days post anthesis	0.835245
SRR768130	whole fruit	no	60 days post anthesis	0.0411873
SRR768131	whole fruit	no	87 days post anthesis	0.124008
SRR7343308	immature fruit flesh	no	immature	0.328116
SRR7343309	immature fruit flesh	no	immature	0.436213
SRR6320494	ripe fruit flesh	no	mature	0.21071
SRR5405143	ripe fruit peel	no	mature	0.364925
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.185607
SRR7403506	fruit	uninfected	mature	0.185174
SRR7403507	fruit	uninfected	mature	0.297461
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0.132256
SRR7403503	fruit	infected with penicillium expansum	mature	0.1231
SRR7403505	fruit	infected with penicillium expansum	mature	0.110652
SRR1613973	Central seeds	no	20DAPF	0.71137
SRR1613974	Central seeds	no	20DAPF	0.840001
SRR1613975	Central seeds	no	20DAPF	0.627238
SRR1613976	Lateral seeds	no	20DAPF	0.989659
SRR1613977	Lateral seeds	no	20DAPF	0.892125
SRR1613978	Lateral seeds	no	20DAPF	0.973474
SRR3744786	stem	no	mature	0.109327
SRR3744787	stem	no	mature	0.124709
SRR3744772	stem	no	mature	0.124386
SRX765691	seedling shoot apex	no	4-6 week old seedling	4.21413
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	3.04775
SRR1089478	leaf	Virus-free	plantlets	0.608581
SRR1089477	leaf	ASGV-infected	plantlets	0.833064
SRR767660	leaf	uninfected	fully developed	0.327043
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	0.581601
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.0474438
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.221043
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.0463216
SRR6308182	young leaf	no	immature leaves	5.29385
SRR3744769	leaf	no	mature	0.129224
SRR3744770	leaf	no	mature	0.225556
SRR3744771	leaf	no	mature	0.088683
SRR5405145	leaf	no	mature	0.444842
SRR6320561	leaf	no	mature	0.141305