Gene detail

Detail information of MD14G1088800 Annotation

Gene ID	Annotation
MD14G1088800	Mitochondrial transcription termination factor family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0171	floral organ senescence abscission MADS-box transcription enhancer factor 2A geranylgeranyl transferase type-1 subunit beta [EC:2.5.1.59] RING finger protein 113A high mobility group protein B3 protein KTI12

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD14G1088800	mRNA	Chr14	11118357	11119072	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Transcription Factors Family	mTERF

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Pyrus communis	PCP023901.1	1	-
Pyrus x bretschneideri	Pbr015272.1	1	-
Solanum lycopersicum	Solyc11g022600.1.1	1	Mitochondrial transcription termination factor family protein
Zea mays	GRMZM2G054517_P01	1	-

Gene Ontology

GO term	Description	Category
--	--	--

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.658425
SRR5252888	dormant buds	no	dormant buds(0 month)	2.64663
SRR5252889	dormant buds	no	dormant buds(0 month)	2.55498
SRR5252886	dormant buds	no	dormant buds(1 months)	4.48268
SRR5252887	dormant buds	no	dormant buds(1 months)	4.16868
SRR5252884	dormant buds	no	dormant buds(2 months)	3.80422
SRR5252882	dormant buds	no	dormant buds(3 months)	1.58976
SRR5252883	dormant buds	no	dormant buds(3 months)	2.59847
SRR5252880	dormant buds	no	dormant buds(4 months)	1.90391
SRR5252881	dormant buds	no	dormant buds(4 months)	2.81769
SRR5252878	bud break	no	bud break	2.52847
SRR5252879	bud break	no	bud break	1.05143
SRR3744766	flower	no	mature	1.93633
SRR3744767	flower	no	mature	0.488244
SRR3744768	flower	no	mature	0.939772
SRR6308190	stigmas	no	open flowers	1.22267
SRR6308181	styles	no	open flowers	1.25513
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0.538485
SRR6308194	sepals	no	open flowers	1.04441
SRR6308193	receptacles	no	open flowers	1.04065
SRR6308189	ovaries	no	open flowers	0.843974
SRR3384922	fruit	no	1 week after full bloom	1.48887
SRR3384921	fruit	no	2 week after full bloom	1.28928
SRR3384920	fruit	no	3 week after full bloom	0.567618
SRR3384919	fruit	no	4 week after full bloom	2.35978
SRR3384923	fruit	no	5 week after full bloom	2.3688
SRR3384918	fruit	no	6 week after full bloom	0.832727
SRR3384917	fruit	no	8 week after full bloom	1.00187
SRR3384916	fruit	no	10 week after full bloom	0.390453
SRR3384915	fruit	no	12 week after full bloom	0.769967
SRR3384914	fruit	no	14 week after full bloom	0.149352
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0.165084
SRR3384911	fruit	no	19 week after full bloom	0.316669
SRR3384910	fruit	no	20 week after full bloom	0.123972
SRR768128	whole fruit	no	25 days post anthesis	1.60011
SRR768129	whole fruit	no	35 days post anthesis	1.17144
SRR768130	whole fruit	no	60 days post anthesis	1.30935
SRR768131	whole fruit	no	87 days post anthesis	0.24639
SRR7343308	immature fruit flesh	no	immature	7.05851
SRR7343309	immature fruit flesh	no	immature	3.52969
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0.70242
SRR7403504	fruit	uninfected	mature	0.164398
SRR7403506	fruit	uninfected	mature	0.0868313
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	1.13986
SRR1613974	Central seeds	no	20DAPF	1.23491
SRR1613975	Central seeds	no	20DAPF	1.18588
SRR1613976	Lateral seeds	no	20DAPF	1.2904
SRR1613977	Lateral seeds	no	20DAPF	1.59717
SRR1613978	Lateral seeds	no	20DAPF	1.49
SRR3744786	stem	no	mature	0.711815
SRR3744787	stem	no	mature	0.564619
SRR3744772	stem	no	mature	0.492703
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.75747
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.65225
SRR1089478	leaf	Virus-free	plantlets	0.282337
SRR1089477	leaf	ASGV-infected	plantlets	0.219006
SRR767660	leaf	uninfected	fully developed	1.71493
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.22018
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.72933
SRR6308182	young leaf	no	immature leaves	1.57143
SRR3744769	leaf	no	mature	0.939201
SRR3744770	leaf	no	mature	0.463154
SRR3744771	leaf	no	mature	0.76462
SRR5405145	leaf	no	mature	0
SRR6320561	leaf	no	mature	0