Gene detail

Detail information of MD14G1152500 Annotation

Gene ID	Annotation
MD14G1152500	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD14G1152500	mRNA	Chr14	24667069	24669886	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.5G147500.1.p	1	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
Pyrus communis	PCP026006.1	1	-
Pyrus x bretschneideri	Pbr036860.1	1	-
Vitis vinifera	GSVIVT01008585001	1	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein

Gene Ontology

GO term	Description	Category
GO:0042254	ribosome biogenesis	biological_process
GO:0030529	intracellular ribonucleoprotein complex	cellular component

KEGG

KO	Description	Enzyme
K02936	large subunit ribosomal protein L7Ae	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01248.22	Ribosomal_L7Ae	116	204	4.10E-25

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	126.907
SRR5252888	dormant buds	no	dormant buds(0 month)	142.823
SRR5252889	dormant buds	no	dormant buds(0 month)	152.814
SRR5252886	dormant buds	no	dormant buds(1 months)	123.304
SRR5252887	dormant buds	no	dormant buds(1 months)	113.997
SRR5252884	dormant buds	no	dormant buds(2 months)	117.615
SRR5252882	dormant buds	no	dormant buds(3 months)	116.246
SRR5252883	dormant buds	no	dormant buds(3 months)	150.196
SRR5252880	dormant buds	no	dormant buds(4 months)	143.555
SRR5252881	dormant buds	no	dormant buds(4 months)	161.003
SRR5252878	bud break	no	bud break	101.056
SRR5252879	bud break	no	bud break	186.294
SRR3744766	flower	no	mature	48.9806
SRR3744767	flower	no	mature	45.604
SRR3744768	flower	no	mature	47.3864
SRR6308190	stigmas	no	open flowers	70.9513
SRR6308181	styles	no	open flowers	89.8975
SRR6308188	filaments	no	open flowers	113.6
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	34.4459
SRR6308192	pollen	no	open flowers	35.1524
SRR6308191	petals	no	open flowers	107.958
SRR6308194	sepals	no	open flowers	86.7563
SRR6308193	receptacles	no	open flowers	151.278
SRR6308189	ovaries	no	open flowers	124.387
SRR3384922	fruit	no	1 week after full bloom	228.376
SRR3384921	fruit	no	2 week after full bloom	205.399
SRR3384920	fruit	no	3 week after full bloom	143.665
SRR3384919	fruit	no	4 week after full bloom	155.534
SRR3384923	fruit	no	5 week after full bloom	139.728
SRR3384918	fruit	no	6 week after full bloom	134.083
SRR3384917	fruit	no	8 week after full bloom	131.516
SRR3384916	fruit	no	10 week after full bloom	105.143
SRR3384915	fruit	no	12 week after full bloom	106.613
SRR3384914	fruit	no	14 week after full bloom	101.788
SRR3384913	fruit	no	16 week after full bloom	110.241
SRR3384912	fruit	no	18 week after full bloom	83.1204
SRR3384911	fruit	no	19 week after full bloom	103.568
SRR3384910	fruit	no	20 week after full bloom	72.285
SRR768128	whole fruit	no	25 days post anthesis	125.609
SRR768129	whole fruit	no	35 days post anthesis	205.36
SRR768130	whole fruit	no	60 days post anthesis	113.188
SRR768131	whole fruit	no	87 days post anthesis	74.1578
SRR7343308	immature fruit flesh	no	immature	123.825
SRR7343309	immature fruit flesh	no	immature	139.004
SRR6320494	ripe fruit flesh	no	mature	46.7911
SRR5405143	ripe fruit peel	no	mature	56.8452
SRR6320572	ripe fruit peel	no	mature	32.6147
SRR7403504	fruit	uninfected	mature	63.4227
SRR7403506	fruit	uninfected	mature	64.7218
SRR7403507	fruit	uninfected	mature	62.2687
SRR7403500	fruit	infected with penicillium expansum	mature	81.5757
SRR7403501	fruit	infected with penicillium expansum	mature	83.0305
SRR7403508	fruit	infected with penicillium expansum	mature	82.9566
SRR7403502	fruit	infected with penicillium expansum	mature	78.2668
SRR7403503	fruit	infected with penicillium expansum	mature	76.3354
SRR7403505	fruit	infected with penicillium expansum	mature	82.0846
SRR1613973	Central seeds	no	20DAPF	183.402
SRR1613974	Central seeds	no	20DAPF	184.579
SRR1613975	Central seeds	no	20DAPF	176.497
SRR1613976	Lateral seeds	no	20DAPF	158.661
SRR1613977	Lateral seeds	no	20DAPF	179.793
SRR1613978	Lateral seeds	no	20DAPF	179.353
SRR3744786	stem	no	mature	62.4705
SRR3744787	stem	no	mature	63.6008
SRR3744772	stem	no	mature	59.7361
SRX765691	seedling shoot apex	no	4-6 week old seedling	130.426
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	128.067
SRR1089478	leaf	Virus-free	plantlets	94.7592
SRR1089477	leaf	ASGV-infected	plantlets	84.4595
SRR767660	leaf	uninfected	fully developed	88.6679
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	133.615
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	67.0652
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	80.7425
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	94.3939
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	88.3031
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	82.7361
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	64.2531
SRR6308182	young leaf	no	immature leaves	210.608
SRR3744769	leaf	no	mature	46.9036
SRR3744770	leaf	no	mature	46.0416
SRR3744771	leaf	no	mature	46.399
SRR5405145	leaf	no	mature	38.221
SRR6320561	leaf	no	mature	68.1982