Gene detail

Detail information of MD14G1194800 Annotation

Gene ID	Annotation
MD14G1194800	voltage dependent anion channel 1

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD14G1194800	mRNA	Chr14	28575609	28576963	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.5G186500.1.p	1	voltage dependent anion channel 1
Rosa multiflora	Rmu_sc0023372.1_g000002.1	1	-
Rosa multiflora	Rmu_sc0005690.1_g000021.1	0.987	-
Rosa multiflora	Rmu_sc0023372.1_g000001.1	0.987	-
Rubus occidentalis	Ro05_G30528	1	-
Fragaria vesca	mrna25946.1	1	voltage dependent anion channel 1
Populus trichocarpa	Potri.012G070300.1	1	voltage dependent anion channel 1

Gene Ontology

GO term	Description	Category
GO:0055085	transmembrane transport	biological_process
GO:0005741	mitochondrial outer membrane	cellular component

KEGG

KO	Description	Enzyme
K15040	voltage-dependent anion channel protein 2	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.164217
SRR5252888	dormant buds	no	dormant buds(0 month)	2.64367
SRR5252889	dormant buds	no	dormant buds(0 month)	2.0417
SRR5252886	dormant buds	no	dormant buds(1 months)	0.839564
SRR5252887	dormant buds	no	dormant buds(1 months)	0
SRR5252884	dormant buds	no	dormant buds(2 months)	0.237498
SRR5252882	dormant buds	no	dormant buds(3 months)	0.238198
SRR5252883	dormant buds	no	dormant buds(3 months)	0
SRR5252880	dormant buds	no	dormant buds(4 months)	0
SRR5252881	dormant buds	no	dormant buds(4 months)	0.131932
SRR5252878	bud break	no	bud break	4.49881
SRR5252879	bud break	no	bud break	1.05025
SRR3744766	flower	no	mature	0.408204
SRR3744767	flower	no	mature	0.13464
SRR3744768	flower	no	mature	0.274107
SRR6308190	stigmas	no	open flowers	2.41085
SRR6308181	styles	no	open flowers	13.8297
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	1.83946
SRR6308194	sepals	no	open flowers	6.53925
SRR6308193	receptacles	no	open flowers	8.21522
SRR6308189	ovaries	no	open flowers	32.4414
SRR3384922	fruit	no	1 week after full bloom	6.35687
SRR3384921	fruit	no	2 week after full bloom	14.2447
SRR3384920	fruit	no	3 week after full bloom	0.212588
SRR3384919	fruit	no	4 week after full bloom	1.5712
SRR3384923	fruit	no	5 week after full bloom	0.653713
SRR3384918	fruit	no	6 week after full bloom	1.0396
SRR3384917	fruit	no	8 week after full bloom	1.50091
SRR3384916	fruit	no	10 week after full bloom	2.24228
SRR3384915	fruit	no	12 week after full bloom	0.461398
SRR3384914	fruit	no	14 week after full bloom	0.783107
SRR3384913	fruit	no	16 week after full bloom	0.790602
SRR3384912	fruit	no	18 week after full bloom	0.123657
SRR3384911	fruit	no	19 week after full bloom	0.830208
SRR3384910	fruit	no	20 week after full bloom	0.0928614
SRR768128	whole fruit	no	25 days post anthesis	2.13733
SRR768129	whole fruit	no	35 days post anthesis	1.32025
SRR768130	whole fruit	no	60 days post anthesis	0.245947
SRR768131	whole fruit	no	87 days post anthesis	1.29588
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0.195555
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0.131911
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	2.07962
SRR1613974	Central seeds	no	20DAPF	2.24518
SRR1613975	Central seeds	no	20DAPF	2.24765
SRR1613976	Lateral seeds	no	20DAPF	0.242901
SRR1613977	Lateral seeds	no	20DAPF	0.338226
SRR1613978	Lateral seeds	no	20DAPF	0.345197
SRR3744786	stem	no	mature	0.0525118
SRR3744787	stem	no	mature	0.156063
SRR3744772	stem	no	mature	0.0518817
SRX765691	seedling shoot apex	no	4-6 week old seedling	2.08983
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.86446
SRR1089478	leaf	Virus-free	plantlets	0
SRR1089477	leaf	ASGV-infected	plantlets	0
SRR767660	leaf	uninfected	fully developed	3.87693
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.23364
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	22.2677
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	3.34316
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	6.13513
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	7.41774
SRR6308182	young leaf	no	immature leaves	1.45851
SRR3744769	leaf	no	mature	0.0534436
SRR3744770	leaf	no	mature	0.0567632
SRR3744771	leaf	no	mature	0.224385
SRR5405145	leaf	no	mature	2.28222
SRR6320561	leaf	no	mature	2.49021