Gene detail

Detail information of MD14G1200100 Annotation

Gene ID	Annotation
MD14G1200100	myb domain protein 94

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
Co-expression network	CFinderM0580	sulfate transmembrane transporter activity beta-glucuronosyltransferase [EC:2.4.1.-] acetylglucosaminyltransferase activity transcription regulatory region sequence-specific DNA binding

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD14G1200100	mRNA	Chr14	28949738	28953384	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Transcription Factors Family	MYB

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT3G47600.1	1	ATMYB94;ATMYBCP70;MYB94\|myb domain protein 94;
Prunus persica	Prupe.5G193200.1.p	1	myb domain protein 31
Pyrus communis	PCP006701.1	1	-
Pyrus x bretschneideri	Pbr009823.1	1	-
Rosa multiflora	Rmu_sc0007958.1_g000006.1	1	-
Rosa multiflora	Rmu_sc0004621.1_g000001.1	1	-
Rubus occidentalis	Ro05_G03244	1	-
Fragaria vesca	mrna26007.1	1	myb domain protein 31
Vitis vinifera	GSVIVT01008005001	1	myb domain protein 96
Solanum lycopersicum	Solyc06g069850.2.1	1	myb domain protein 94
Solanum lycopersicum	Solyc10g081490.1.1	1	myb domain protein 60
Nicotiana benthamiana	Niben101Scf03716g04008.1	1	Myb-related protein 306
Oryza sativa	LOC_Os11g35390.1	1	"MYB family transcription factor, putative, expressed"

Gene Ontology

GO term	Description	Category
GO:0003677	DNA binding	molecular_function
GO:0003682	chromatin binding	molecular_function

KEGG

KO	Description	Enzyme
K09422	"transcription factor MYB, plant"	-

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00249.27	Myb_DNA-binding	14	61	4.60E-16
PF00249.27	Myb_DNA-binding	67	112	1.40E-13

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	0.163559
SRR5252888	dormant buds	no	dormant buds(0 month)	1.4825
SRR5252889	dormant buds	no	dormant buds(0 month)	1.04952
SRR5252886	dormant buds	no	dormant buds(1 months)	0.209247
SRR5252887	dormant buds	no	dormant buds(1 months)	0.111194
SRR5252884	dormant buds	no	dormant buds(2 months)	0.177577
SRR5252882	dormant buds	no	dormant buds(3 months)	0.356201
SRR5252883	dormant buds	no	dormant buds(3 months)	0.194071
SRR5252880	dormant buds	no	dormant buds(4 months)	0.177746
SRR5252881	dormant buds	no	dormant buds(4 months)	0.0986452
SRR5252878	bud break	no	bud break	0.35408
SRR5252879	bud break	no	bud break	0.294477
SRR3744766	flower	no	mature	0.0377222
SRR3744767	flower	no	mature	0.0330975
SRR3744768	flower	no	mature	0.100456
SRR6308190	stigmas	no	open flowers	0
SRR6308181	styles	no	open flowers	0
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0
SRR6308193	receptacles	no	open flowers	0
SRR6308189	ovaries	no	open flowers	0
SRR3384922	fruit	no	1 week after full bloom	0.0833774
SRR3384921	fruit	no	2 week after full bloom	0.361004
SRR3384920	fruit	no	3 week after full bloom	0.31787
SRR3384919	fruit	no	4 week after full bloom	0.513914
SRR3384923	fruit	no	5 week after full bloom	1.32655
SRR3384918	fruit	no	6 week after full bloom	0.854943
SRR3384917	fruit	no	8 week after full bloom	0.561053
SRR3384916	fruit	no	10 week after full bloom	0.145771
SRR3384915	fruit	no	12 week after full bloom	0.172475
SRR3384914	fruit	no	14 week after full bloom	0.418189
SRR3384913	fruit	no	16 week after full bloom	0.295534
SRR3384912	fruit	no	18 week after full bloom	0.0924479
SRR3384911	fruit	no	19 week after full bloom	0.177337
SRR3384910	fruit	no	20 week after full bloom	0.13885
SRR768128	whole fruit	no	25 days post anthesis	0.400403
SRR768129	whole fruit	no	35 days post anthesis	0.549628
SRR768130	whole fruit	no	60 days post anthesis	0.737202
SRR768131	whole fruit	no	87 days post anthesis	0.138725
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0.984732
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0.146444
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0.0991764
SRR1613973	Central seeds	no	20DAPF	0.297309
SRR1613974	Central seeds	no	20DAPF	0.408516
SRR1613975	Central seeds	no	20DAPF	0.231094
SRR1613976	Lateral seeds	no	20DAPF	0.218772
SRR1613977	Lateral seeds	no	20DAPF	0.366683
SRR1613978	Lateral seeds	no	20DAPF	0.647725
SRR3744786	stem	no	mature	0.0388161
SRR3744787	stem	no	mature	0.0768572
SRR3744772	stem	no	mature	0.153307
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.407183
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.127683
SRR1089478	leaf	Virus-free	plantlets	0.159574
SRR1089477	leaf	ASGV-infected	plantlets	0.495119
SRR767660	leaf	uninfected	fully developed	0.485278
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.04729
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	0
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.419634
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.412582
SRR6308182	young leaf	no	immature leaves	0.100169
SRR3744769	leaf	no	mature	1.10837
SRR3744770	leaf	no	mature	1.54882
SRR3744771	leaf	no	mature	1.36285
SRR5405145	leaf	no	mature	5.98141
SRR6320561	leaf	no	mature	3.75045