| Gene ID | Annotation |
|---|---|
| MD14G1238900 | NF-X-like 1 |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM1070 | NF-X1 transcriptional repressor NF-X1 pre-mRNA-splicing factor RBM22/SLT11 extracellular polysaccharide biosynthetic process response to microbial phytotoxin dTDP-rhamnose biosynthetic process response to light intensity |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD14G1238900 | mRNA | Chr14 | 31806410 | 31810952 | + |
| CDS: |
| MD14G1238900 |
| Protein: |
| MD14G1238900 |
| Gene family | Subfamily |
|---|---|
| Transcription Factors Family | NF-X1 |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Arabidopsis thaliana | AT1G10170.1 | 1 | ATNFXL1;NFXL1|NF-X-like 1 |
| Prunus persica | Prupe.5G236400.1.p | 1 | NF-X-like 1 |
| Pyrus x bretschneideri | Pbr038828.1 | 1 | - |
| Rosa multiflora | Rmu_sc0013399.1_g000001.1 | 1 | - |
| Rubus occidentalis | Ro05_G03639 | 1 | - |
| Fragaria vesca | mrna09346.1 | 1 | NF-X-like 1 |
| Vitis vinifera | GSVIVT01008482001 | 1 | NF-X-like 1 |
| Populus trichocarpa | Potri.012G043700.1 | 1 | NF-X-like 1 |
| Nicotiana benthamiana | Niben101Scf05912g02001.1 | 1 | Transcriptional repressor NF-X1 |
| Oryza sativa | LOC_Os06g14190.1 | 1 | "NF-X1-type zinc finger protein, putative, expressed" |
| Zea mays | GRMZM2G409627_P01 | 1 | - |
| Zea mays | GRMZM2G307823_P01 | 1 | - |
| Zea mays | GRMZM2G087787_P01 | 0.75 | - |
| GO term | Description | Category |
|---|---|---|
| GO:0005634 | nucleus | cellular component |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0003700 | transcription factor activity, sequence-specific DNA binding | molecular_function |
| GO:0005515 | protein binding | molecular_function |
| GO:0008270 | zinc ion binding | molecular_function |
| KO | Description | Enzyme |
|---|---|---|
| K12236 | transcriptional repressor NF-X1 | - |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |