Gene detail

Detail information of MD15G1203800 Annotation

Gene ID	Annotation
MD15G1203800	arginine methyltransferase 11

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD15G1203800	mRNA	Chr15	16210542	16213676	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
Epigenetic Regulators	PRMT

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G29510.1	1	ATPRMT11;ATPRMT1B;PRMT11;PRMT1B\|ARABIDOPSIS THALIANA ARGININE METHYLTRANSFERASE 11;ARABIDOPSIS THALIANA PROTEIN ARGININE METHYLTRANSFERASE 1B;arginine methyltransferase 11;PROTEIN ARGININE METHYLTRANSFERASE 1B
Pyrus communis	PCP013124.1	1	-
Pyrus x bretschneideri	Pbr015577.1	1	-
Rosa multiflora	Rmu_sc0000965.1_g000015.1	1	-
Rubus occidentalis	Ro01_G00871	1	-
Fragaria vesca	mrna11395.1	1	arginine methyltransferase 11
Vitis vinifera	GSVIVT01015236001	1	arginine methyltransferase 11
Solanum lycopersicum	Solyc12g008760.1.1	1	arginine methyltransferase 11
Solanum lycopersicum	Solyc01g096550.2.1	1	protein arginine methyltransferase 3
Populus trichocarpa	Potri.018G067200.1	1	arginine methyltransferase 11
Nicotiana benthamiana	Niben101Scf02816g07009.1	1	arginine methyltransferase 11 LENGTH=390
Oryza sativa	LOC_Os09g19560.1	1	"methyltransferase, putative, expressed"
Zea mays	GRMZM2G003038_P01	1	Protein arginine N-methyltransferase 1;

Gene Ontology

GO term	Description	Category
GO:0006479	protein methylation	biological_process
GO:0008276	protein methyltransferase activity	molecular_function
GO:0005737	cytoplasm	cellular component

KEGG

KO	Description	Enzyme
K11434	type I protein arginine methyltransferase	EC:2.1.1.319

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	13.7911
SRR5252888	dormant buds	no	dormant buds(0 month)	13.553
SRR5252889	dormant buds	no	dormant buds(0 month)	9.96855
SRR5252886	dormant buds	no	dormant buds(1 months)	14.4837
SRR5252887	dormant buds	no	dormant buds(1 months)	16.192
SRR5252884	dormant buds	no	dormant buds(2 months)	14.2628
SRR5252882	dormant buds	no	dormant buds(3 months)	12.3278
SRR5252883	dormant buds	no	dormant buds(3 months)	13.5599
SRR5252880	dormant buds	no	dormant buds(4 months)	10.33
SRR5252881	dormant buds	no	dormant buds(4 months)	10.0488
SRR5252878	bud break	no	bud break	6.70521
SRR5252879	bud break	no	bud break	9.80697
SRR3744766	flower	no	mature	5.18669
SRR3744767	flower	no	mature	5.41344
SRR3744768	flower	no	mature	4.99357
SRR6308190	stigmas	no	open flowers	2.76843
SRR6308181	styles	no	open flowers	5.63393
SRR6308188	filaments	no	open flowers	10.013
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	5.28647
SRR6308192	pollen	no	open flowers	6.99625
SRR6308191	petals	no	open flowers	13.1396
SRR6308194	sepals	no	open flowers	14.9065
SRR6308193	receptacles	no	open flowers	11.8878
SRR6308189	ovaries	no	open flowers	6.39765
SRR3384922	fruit	no	1 week after full bloom	31.847
SRR3384921	fruit	no	2 week after full bloom	14.3193
SRR3384920	fruit	no	3 week after full bloom	7.88674
SRR3384919	fruit	no	4 week after full bloom	13.9971
SRR3384923	fruit	no	5 week after full bloom	11.7612
SRR3384918	fruit	no	6 week after full bloom	11.824
SRR3384917	fruit	no	8 week after full bloom	8.57204
SRR3384916	fruit	no	10 week after full bloom	6.18655
SRR3384915	fruit	no	12 week after full bloom	5.85589
SRR3384914	fruit	no	14 week after full bloom	8.02758
SRR3384913	fruit	no	16 week after full bloom	10.7416
SRR3384912	fruit	no	18 week after full bloom	10.4426
SRR3384911	fruit	no	19 week after full bloom	10.1314
SRR3384910	fruit	no	20 week after full bloom	6.07413
SRR768128	whole fruit	no	25 days post anthesis	4.97912
SRR768129	whole fruit	no	35 days post anthesis	8.70533
SRR768130	whole fruit	no	60 days post anthesis	6.27236
SRR768131	whole fruit	no	87 days post anthesis	5.35681
SRR7343308	immature fruit flesh	no	immature	15.4384
SRR7343309	immature fruit flesh	no	immature	15.7272
SRR6320494	ripe fruit flesh	no	mature	5.53619
SRR5405143	ripe fruit peel	no	mature	7.00348
SRR6320572	ripe fruit peel	no	mature	5.33205
SRR7403504	fruit	uninfected	mature	4.08022
SRR7403506	fruit	uninfected	mature	4.66136
SRR7403507	fruit	uninfected	mature	4.47315
SRR7403500	fruit	infected with penicillium expansum	mature	4.76502
SRR7403501	fruit	infected with penicillium expansum	mature	3.70947
SRR7403508	fruit	infected with penicillium expansum	mature	4.76329
SRR7403502	fruit	infected with penicillium expansum	mature	5.36256
SRR7403503	fruit	infected with penicillium expansum	mature	5.05143
SRR7403505	fruit	infected with penicillium expansum	mature	4.92982
SRR1613973	Central seeds	no	20DAPF	14.813
SRR1613974	Central seeds	no	20DAPF	17.3186
SRR1613975	Central seeds	no	20DAPF	15.1348
SRR1613976	Lateral seeds	no	20DAPF	14.39
SRR1613977	Lateral seeds	no	20DAPF	13.8963
SRR1613978	Lateral seeds	no	20DAPF	13.8855
SRR3744786	stem	no	mature	5.31137
SRR3744787	stem	no	mature	4.7592
SRR3744772	stem	no	mature	5.53784
SRX765691	seedling shoot apex	no	4-6 week old seedling	11.4144
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	9.09574
SRR1089478	leaf	Virus-free	plantlets	1.7785
SRR1089477	leaf	ASGV-infected	plantlets	2.59683
SRR767660	leaf	uninfected	fully developed	4.45679
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	5.01031
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.76179
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	6.85406
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	2.0706
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	1.12331
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	3.24722
SRR6308182	young leaf	no	immature leaves	21.7526
SRR3744769	leaf	no	mature	4.01946
SRR3744770	leaf	no	mature	3.77366
SRR3744771	leaf	no	mature	4.24775
SRR5405145	leaf	no	mature	12.6671
SRR6320561	leaf	no	mature	9.45743