Gene detail

Detail information of MD15G1215200 Annotation

Gene ID	Annotation
MD15G1215200	acyl-CoA-binding protein 6

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD15G1215200	mRNA	Chr15	17332191	17333336	+

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.7G202100.1.p	1	acyl-CoA-binding protein 6
Pyrus communis	PCP025065.1	1	-
Pyrus x bretschneideri	Pbr031686.1	1	-
Rubus occidentalis	Ro01_G02971	1	-

Gene Ontology

GO term	Description	Category
GO:0000062	fatty-acyl-CoA binding	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00887.15	ACBP	6	84	4.30E-27

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	17.5168
SRR5252888	dormant buds	no	dormant buds(0 month)	0
SRR5252889	dormant buds	no	dormant buds(0 month)	1.27956
SRR5252886	dormant buds	no	dormant buds(1 months)	1.87081
SRR5252887	dormant buds	no	dormant buds(1 months)	1.24269
SRR5252884	dormant buds	no	dormant buds(2 months)	3.17532
SRR5252882	dormant buds	no	dormant buds(3 months)	5.17509
SRR5252883	dormant buds	no	dormant buds(3 months)	7.80804
SRR5252880	dormant buds	no	dormant buds(4 months)	3.57561
SRR5252881	dormant buds	no	dormant buds(4 months)	1.10244
SRR5252878	bud break	no	bud break	4.35284
SRR5252879	bud break	no	bud break	2.63282
SRR3744766	flower	no	mature	2.02241
SRR3744767	flower	no	mature	1.6353
SRR3744768	flower	no	mature	1.45177
SRR6308190	stigmas	no	open flowers	0
SRR6308181	styles	no	open flowers	0.516481
SRR6308188	filaments	no	open flowers	0.785535
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	5.80917
SRR6308193	receptacles	no	open flowers	0.257204
SRR6308189	ovaries	no	open flowers	0.416869
SRR3384922	fruit	no	1 week after full bloom	3.91517
SRR3384921	fruit	no	2 week after full bloom	0.403612
SRR3384920	fruit	no	3 week after full bloom	0.177694
SRR3384919	fruit	no	4 week after full bloom	0.328325
SRR3384923	fruit	no	5 week after full bloom	0.624469
SRR3384918	fruit	no	6 week after full bloom	0.173791
SRR3384917	fruit	no	8 week after full bloom	0.250909
SRR3384916	fruit	no	10 week after full bloom	0.814879
SRR3384915	fruit	no	12 week after full bloom	0.385663
SRR3384914	fruit	no	14 week after full bloom	0.374038
SRR3384913	fruit	no	16 week after full bloom	0
SRR3384912	fruit	no	18 week after full bloom	0
SRR3384911	fruit	no	19 week after full bloom	0
SRR3384910	fruit	no	20 week after full bloom	0.155238
SRR768128	whole fruit	no	25 days post anthesis	1.33168
SRR768129	whole fruit	no	35 days post anthesis	0
SRR768130	whole fruit	no	60 days post anthesis	0
SRR768131	whole fruit	no	87 days post anthesis	0
SRR7343308	immature fruit flesh	no	immature	0
SRR7343309	immature fruit flesh	no	immature	0
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.102703
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0.327685
SRR1613974	Central seeds	no	20DAPF	0.60034
SRR1613975	Central seeds	no	20DAPF	0.611291
SRR1613976	Lateral seeds	no	20DAPF	0.562624
SRR1613977	Lateral seeds	no	20DAPF	0.373059
SRR1613978	Lateral seeds	no	20DAPF	0.428342
SRR3744786	stem	no	mature	1.53891
SRR3744787	stem	no	mature	1.5271
SRR3744772	stem	no	mature	1.3438
SRX765691	seedling shoot apex	no	4-6 week old seedling	0.244906
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	0.416646
SRR1089478	leaf	Virus-free	plantlets	11.6059
SRR1089477	leaf	ASGV-infected	plantlets	12.0034
SRR767660	leaf	uninfected	fully developed	56.567
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	5.42888
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	27.9251
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	27.5995
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	27.4109
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	27.9575
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	21.7928
SRR6308182	young leaf	no	immature leaves	1.29412
SRR3744769	leaf	no	mature	5.77219
SRR3744770	leaf	no	mature	6.00836
SRR3744771	leaf	no	mature	6.5527
SRR5405145	leaf	no	mature	44.3212
SRR6320561	leaf	no	mature	39.9391