Gene detail

Detail information of MD15G1230700 Annotation

Gene ID	Annotation
MD15G1230700	phosphatidylinositolglycan-related

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD15G1230700	mRNA	Chr15	18871866	18874231	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT4G35530.1	1	phosphatidylinositolglycan-related
Prunus persica	Prupe.7G183400.1.p	1	phosphatidylinositolglycan-related
Pyrus communis	PCP037186.1	1	-
Pyrus x bretschneideri	Pbr037326.1	1	-
Rosa multiflora	Rmu_sc0024596.1_g000005.1	1	-
Rubus occidentalis	Ro01_G01296	1	-
Vitis vinifera	GSVIVT01013391001	1	phosphatidylinositolglycan-related
Solanum lycopersicum	Solyc00g007090.2.1	1	phosphatidylinositolglycan-related
Populus trichocarpa	Potri.018G026700.2	1	phosphatidylinositolglycan-related
Nicotiana benthamiana	Niben101Scf00585g01003.1	1	Phosphatidylinositol N-acetylglucosaminyltransferase subunit H
Nicotiana benthamiana	Niben101Scf02203g03014.1	0.828	"GPI-GlcNAc transferase complex, PIG-H component [Medicago truncatula]"
Oryza sativa	LOC_Os05g07260.2	1	"phosphatidylinositolglycan-related, putative, expressed"
Zea mays	GRMZM5G809361_P01	1	-

Gene Ontology

GO term	Description	Category
GO:0017176	phosphatidylinositol N-acetylglucosaminyltransferase activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	3.4523
SRR5252888	dormant buds	no	dormant buds(0 month)	3.44225
SRR5252889	dormant buds	no	dormant buds(0 month)	4.40304
SRR5252886	dormant buds	no	dormant buds(1 months)	6.19464
SRR5252887	dormant buds	no	dormant buds(1 months)	3.77594
SRR5252884	dormant buds	no	dormant buds(2 months)	2.16468
SRR5252882	dormant buds	no	dormant buds(3 months)	2.01598
SRR5252883	dormant buds	no	dormant buds(3 months)	2.02777
SRR5252880	dormant buds	no	dormant buds(4 months)	4.48822
SRR5252881	dormant buds	no	dormant buds(4 months)	4.12282
SRR5252878	bud break	no	bud break	5.54947
SRR5252879	bud break	no	bud break	5.38454
SRR3744766	flower	no	mature	2.81257
SRR3744767	flower	no	mature	3.12484
SRR3744768	flower	no	mature	2.77802
SRR6308190	stigmas	no	open flowers	2.69066
SRR6308181	styles	no	open flowers	2.94166
SRR6308188	filaments	no	open flowers	2.21341
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	4.06958
SRR6308192	pollen	no	open flowers	4.64264
SRR6308191	petals	no	open flowers	3.10337
SRR6308194	sepals	no	open flowers	1.96179
SRR6308193	receptacles	no	open flowers	2.503
SRR6308189	ovaries	no	open flowers	3.47341
SRR3384922	fruit	no	1 week after full bloom	3.99274
SRR3384921	fruit	no	2 week after full bloom	4.00757
SRR3384920	fruit	no	3 week after full bloom	6.08879
SRR3384919	fruit	no	4 week after full bloom	4.09102
SRR3384923	fruit	no	5 week after full bloom	3.70815
SRR3384918	fruit	no	6 week after full bloom	5.07534
SRR3384917	fruit	no	8 week after full bloom	3.61489
SRR3384916	fruit	no	10 week after full bloom	3.29992
SRR3384915	fruit	no	12 week after full bloom	3.37883
SRR3384914	fruit	no	14 week after full bloom	2.25748
SRR3384913	fruit	no	16 week after full bloom	3.00202
SRR3384912	fruit	no	18 week after full bloom	3.13921
SRR3384911	fruit	no	19 week after full bloom	3.08808
SRR3384910	fruit	no	20 week after full bloom	1.9343
SRR768128	whole fruit	no	25 days post anthesis	4.27444
SRR768129	whole fruit	no	35 days post anthesis	3.06545
SRR768130	whole fruit	no	60 days post anthesis	2.73037
SRR768131	whole fruit	no	87 days post anthesis	3.98945
SRR7343308	immature fruit flesh	no	immature	4.72065
SRR7343309	immature fruit flesh	no	immature	3.85594
SRR6320494	ripe fruit flesh	no	mature	1.6355
SRR5405143	ripe fruit peel	no	mature	3.12123
SRR6320572	ripe fruit peel	no	mature	0.352936
SRR7403504	fruit	uninfected	mature	1.7312
SRR7403506	fruit	uninfected	mature	1.65864
SRR7403507	fruit	uninfected	mature	1.46439
SRR7403500	fruit	infected with penicillium expansum	mature	1.1446
SRR7403501	fruit	infected with penicillium expansum	mature	0.772076
SRR7403508	fruit	infected with penicillium expansum	mature	0.6679
SRR7403502	fruit	infected with penicillium expansum	mature	0.946704
SRR7403503	fruit	infected with penicillium expansum	mature	0.961266
SRR7403505	fruit	infected with penicillium expansum	mature	0.69125
SRR1613973	Central seeds	no	20DAPF	8.10161
SRR1613974	Central seeds	no	20DAPF	8.08925
SRR1613975	Central seeds	no	20DAPF	7.21414
SRR1613976	Lateral seeds	no	20DAPF	7.91688
SRR1613977	Lateral seeds	no	20DAPF	7.48942
SRR1613978	Lateral seeds	no	20DAPF	8.50983
SRR3744786	stem	no	mature	2.15367
SRR3744787	stem	no	mature	1.8652
SRR3744772	stem	no	mature	2.22568
SRX765691	seedling shoot apex	no	4-6 week old seedling	4.32959
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	4.19505
SRR1089478	leaf	Virus-free	plantlets	0
SRR1089477	leaf	ASGV-infected	plantlets	1.40318
SRR767660	leaf	uninfected	fully developed	0.423261
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	1.76865
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	1.62691
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	7.2913
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	0.366401
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	3.61704
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	1.97906
SRR6308182	young leaf	no	immature leaves	6.30489
SRR3744769	leaf	no	mature	1.30506
SRR3744770	leaf	no	mature	2.35677
SRR3744771	leaf	no	mature	1.28696
SRR5405145	leaf	no	mature	1.48889
SRR6320561	leaf	no	mature	3.45646