Gene detail

Detail information of MD15G1345700 Annotation

Gene ID	Annotation
MD15G1345700	aldehyde dehydrogenase 3H1

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD15G1345700	mRNA	Chr15	40578958	40589270	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G44170.2	1	ALDH3H1;ALDH4\|aldehyde dehydrogenase 3H1;aldehyde dehydrogenase 4
Arabidopsis thaliana	AT1G44170.1	1	ALDH3H1;ALDH4\|aldehyde dehydrogenase 3H1;aldehyde dehydrogenase 4
Prunus persica	Prupe.1G493800.3.p	1	aldehyde dehydrogenase 3H1
Rosa multiflora	Rmu_sc0035469.1_g000002.1	1	-
Rosa multiflora	Rmu_sc0028042.1_g000002.1	1	-
Vitis vinifera	GSVIVT01008845001	1	aldehyde dehydrogenase 3H1
Solanum lycopersicum	Solyc06g060250.2.1	1	aldehyde dehydrogenase 3H1
Nicotiana benthamiana	Niben101Scf05304g00009.1	1	Aldehyde dehydrogenase family 3 member B2
Oryza sativa	LOC_Os12g07810.1	1	"aldehyde dehydrogenase, putative, expressed"
Zea mays	GRMZM2G118800_P01	1	Aldehyde dehydrogenase
Zea mays	GRMZM2G060800_P01	0.819	Aldehyde dehydrogenase

Gene Ontology

GO term	Description	Category
GO:0004030	aldehyde dehydrogenase [NAD(P)+] activity	molecular_function
GO:0006081	cellular aldehyde metabolic process	biological_process
GO:0055114	oxidation-reduction process	biological_process

KEGG

KO	Description	Enzyme
K00128	aldehyde dehydrogenase (NAD+)	EC:1.2.1.3

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	15.5124
SRR5252888	dormant buds	no	dormant buds(0 month)	4.8714
SRR5252889	dormant buds	no	dormant buds(0 month)	5.69858
SRR5252886	dormant buds	no	dormant buds(1 months)	2.54806
SRR5252887	dormant buds	no	dormant buds(1 months)	3.03048
SRR5252884	dormant buds	no	dormant buds(2 months)	2.57429
SRR5252882	dormant buds	no	dormant buds(3 months)	2.4786
SRR5252883	dormant buds	no	dormant buds(3 months)	2.81339
SRR5252880	dormant buds	no	dormant buds(4 months)	3.09208
SRR5252881	dormant buds	no	dormant buds(4 months)	1.88764
SRR5252878	bud break	no	bud break	3.90108
SRR5252879	bud break	no	bud break	4.83815
SRR3744766	flower	no	mature	13.0077
SRR3744767	flower	no	mature	14.6814
SRR3744768	flower	no	mature	13.854
SRR6308190	stigmas	no	open flowers	12.0708
SRR6308181	styles	no	open flowers	9.88869
SRR6308188	filaments	no	open flowers	4.87795
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	47.384
SRR6308192	pollen	no	open flowers	55.3806
SRR6308191	petals	no	open flowers	9.7903
SRR6308194	sepals	no	open flowers	5.00766
SRR6308193	receptacles	no	open flowers	4.27397
SRR6308189	ovaries	no	open flowers	11.5029
SRR3384922	fruit	no	1 week after full bloom	7.83131
SRR3384921	fruit	no	2 week after full bloom	8.42459
SRR3384920	fruit	no	3 week after full bloom	11.3804
SRR3384919	fruit	no	4 week after full bloom	16.5582
SRR3384923	fruit	no	5 week after full bloom	20.7257
SRR3384918	fruit	no	6 week after full bloom	16.4028
SRR3384917	fruit	no	8 week after full bloom	24.4621
SRR3384916	fruit	no	10 week after full bloom	27.1298
SRR3384915	fruit	no	12 week after full bloom	29.3498
SRR3384914	fruit	no	14 week after full bloom	30.6957
SRR3384913	fruit	no	16 week after full bloom	33.5842
SRR3384912	fruit	no	18 week after full bloom	33.9291
SRR3384911	fruit	no	19 week after full bloom	34.0842
SRR3384910	fruit	no	20 week after full bloom	35.2606
SRR768128	whole fruit	no	25 days post anthesis	10.3024
SRR768129	whole fruit	no	35 days post anthesis	15.66
SRR768130	whole fruit	no	60 days post anthesis	19.6112
SRR768131	whole fruit	no	87 days post anthesis	37.3475
SRR7343308	immature fruit flesh	no	immature	19.1319
SRR7343309	immature fruit flesh	no	immature	21.6536
SRR6320494	ripe fruit flesh	no	mature	32.5345
SRR5405143	ripe fruit peel	no	mature	29.3152
SRR6320572	ripe fruit peel	no	mature	18.7485
SRR7403504	fruit	uninfected	mature	27.7341
SRR7403506	fruit	uninfected	mature	27.6805
SRR7403507	fruit	uninfected	mature	27.7137
SRR7403500	fruit	infected with penicillium expansum	mature	6.31452
SRR7403501	fruit	infected with penicillium expansum	mature	6.89923
SRR7403508	fruit	infected with penicillium expansum	mature	7.05213
SRR7403502	fruit	infected with penicillium expansum	mature	5.91146
SRR7403503	fruit	infected with penicillium expansum	mature	5.44877
SRR7403505	fruit	infected with penicillium expansum	mature	5.12827
SRR1613973	Central seeds	no	20DAPF	4.63374
SRR1613974	Central seeds	no	20DAPF	5.48433
SRR1613975	Central seeds	no	20DAPF	4.51059
SRR1613976	Lateral seeds	no	20DAPF	7.88162
SRR1613977	Lateral seeds	no	20DAPF	7.23925
SRR1613978	Lateral seeds	no	20DAPF	8.17679
SRR3744786	stem	no	mature	4.70507
SRR3744787	stem	no	mature	5.18138
SRR3744772	stem	no	mature	4.68608
SRX765691	seedling shoot apex	no	4-6 week old seedling	4.84573
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	6.21257
SRR1089478	leaf	Virus-free	plantlets	10.2278
SRR1089477	leaf	ASGV-infected	plantlets	7.86145
SRR767660	leaf	uninfected	fully developed	4.24446
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	5.32452
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	6.09211
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	5.64765
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	3.28379
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	5.6522
SRR6308182	young leaf	no	immature leaves	6.47313
SRR3744769	leaf	no	mature	3.85709
SRR3744770	leaf	no	mature	4.05724
SRR3744771	leaf	no	mature	4.37067
SRR5405145	leaf	no	mature	8.10816
SRR6320561	leaf	no	mature	8.899