Gene detail

Detail information of MD15G1362800 Annotation

Gene ID	Annotation
MD15G1362800	Eukaryotic aspartyl protease family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD15G1362800	mRNA	Chr15	43800230	43813024	-

Sequences

CDS:

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Prunus persica	Prupe.1G511100.1.p	1	Eukaryotic aspartyl protease family protein
Pyrus communis	PCP040485.1	1	-
Pyrus x bretschneideri	Pbr042163.1	1	-
Vitis vinifera	GSVIVT01008978001	1	Eukaryotic aspartyl protease family protein
Populus trichocarpa	Potri.002G092100.1	1	Eukaryotic aspartyl protease family protein
Nicotiana benthamiana	Niben101Scf01870g09015.1	1	Eukaryotic aspartyl protease family protein LENGTH=528
Nicotiana benthamiana	Niben101Scf07811g00010.1	0.771	Eukaryotic aspartyl protease family protein LENGTH=528

Gene Ontology

GO term	Description	Category
GO:0006508	proteolysis	biological_process
GO:0004190	aspartic-type endopeptidase activity	molecular_function

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14543.2	TAXi_N	105	286	1.50E-31
PF14541.2	TAXi_C	319	448	7.80E-14

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	2.13914
SRR5252888	dormant buds	no	dormant buds(0 month)	2.00144
SRR5252889	dormant buds	no	dormant buds(0 month)	2.47313
SRR5252886	dormant buds	no	dormant buds(1 months)	2.48594
SRR5252887	dormant buds	no	dormant buds(1 months)	1.62127
SRR5252884	dormant buds	no	dormant buds(2 months)	1.34253
SRR5252882	dormant buds	no	dormant buds(3 months)	1.63502
SRR5252883	dormant buds	no	dormant buds(3 months)	1.15282
SRR5252880	dormant buds	no	dormant buds(4 months)	2.30366
SRR5252881	dormant buds	no	dormant buds(4 months)	2.02426
SRR5252878	bud break	no	bud break	2.48572
SRR5252879	bud break	no	bud break	2.70339
SRR3744766	flower	no	mature	0.722258
SRR3744767	flower	no	mature	0.649198
SRR3744768	flower	no	mature	0.422631
SRR6308190	stigmas	no	open flowers	1.60769
SRR6308181	styles	no	open flowers	1.44904
SRR6308188	filaments	no	open flowers	1.58162
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0.510216
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	1.43689
SRR6308194	sepals	no	open flowers	1.47444
SRR6308193	receptacles	no	open flowers	1.30657
SRR6308189	ovaries	no	open flowers	2.97355
SRR3384922	fruit	no	1 week after full bloom	3.69152
SRR3384921	fruit	no	2 week after full bloom	3.80092
SRR3384920	fruit	no	3 week after full bloom	2.01665
SRR3384919	fruit	no	4 week after full bloom	2.53697
SRR3384923	fruit	no	5 week after full bloom	1.58329
SRR3384918	fruit	no	6 week after full bloom	2.18218
SRR3384917	fruit	no	8 week after full bloom	1.21173
SRR3384916	fruit	no	10 week after full bloom	2.28251
SRR3384915	fruit	no	12 week after full bloom	1.95563
SRR3384914	fruit	no	14 week after full bloom	1.44509
SRR3384913	fruit	no	16 week after full bloom	1.17018
SRR3384912	fruit	no	18 week after full bloom	0.948404
SRR3384911	fruit	no	19 week after full bloom	1.10113
SRR3384910	fruit	no	20 week after full bloom	0.712216
SRR768128	whole fruit	no	25 days post anthesis	2.71097
SRR768129	whole fruit	no	35 days post anthesis	3.03659
SRR768130	whole fruit	no	60 days post anthesis	1.69704
SRR768131	whole fruit	no	87 days post anthesis	0.97682
SRR7343308	immature fruit flesh	no	immature	1.32947
SRR7343309	immature fruit flesh	no	immature	2.12225
SRR6320494	ripe fruit flesh	no	mature	0.254751
SRR5405143	ripe fruit peel	no	mature	0.593196
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0.20006
SRR7403506	fruit	uninfected	mature	0.237752
SRR7403507	fruit	uninfected	mature	0.564579
SRR7403500	fruit	infected with penicillium expansum	mature	0.1939
SRR7403501	fruit	infected with penicillium expansum	mature	0.0959143
SRR7403508	fruit	infected with penicillium expansum	mature	0.0691439
SRR7403502	fruit	infected with penicillium expansum	mature	0.0534583
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	2.68987
SRR1613974	Central seeds	no	20DAPF	2.30076
SRR1613975	Central seeds	no	20DAPF	2.59677
SRR1613976	Lateral seeds	no	20DAPF	2.51374
SRR1613977	Lateral seeds	no	20DAPF	2.80203
SRR1613978	Lateral seeds	no	20DAPF	2.37925
SRR3744786	stem	no	mature	0.784361
SRR3744787	stem	no	mature	0.449187
SRR3744772	stem	no	mature	0.753476
SRX765691	seedling shoot apex	no	4-6 week old seedling	3.17023
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	3.37868
SRR1089478	leaf	Virus-free	plantlets	1.29944
SRR1089477	leaf	ASGV-infected	plantlets	1.27675
SRR767660	leaf	uninfected	fully developed	2.10925
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.35475
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	2.27052
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	0
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	1.37323
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	0.665499
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	1.12051
SRR6308182	young leaf	no	immature leaves	2.74353
SRR3744769	leaf	no	mature	0.949785
SRR3744770	leaf	no	mature	0.665717
SRR3744771	leaf	no	mature	0.720864
SRR5405145	leaf	no	mature	0.924767
SRR6320561	leaf	no	mature	2.72695