| Gene ID | Annotation |
|---|---|
| MD15G1388900 | histone mono-ubiquitination 2 |
| Network Category | Global Network | Conditional network (different tissues and developmental stages) |
|---|---|---|
| Coexpression Positive | Top300 PCC genelist | Top300 PCC genelist |
| Coexpression Negative | Top300 PCC genelist | Top300 PCC genelist |
| Method | Module ID | Function Annotation |
|---|---|---|
| Co-expression network | CFinderM0586 | DnaJ homolog subfamily C member 13 regulatory region DNA binding 1-phosphatidylinositol-3-kinase activity serine/threonine-protein kinase mTOR [EC:2.7.11.1] rRNA transcription amyloplast organization nuclear-transcribed mRNA catabolic process positive regulation of cell growth positive regulation of rRNA processing positive regulation of embryonic development endosome organization negative regulation of autophagy regulator of nonsense transcripts 1 [EC:3.6.4.-] response to starvation RNA helicase activity negative gravitropism nucleus cytoplasmic mRNA processing body late endosome vegetative to reproductive phase transition of meristem protein ubiquitination involved in ubiquitin-dependent protein catabolic process zinc ion binding protein self-association endocytosis hormone-mediated signaling pathway vacuolar protein sorting-associated protein 8 trichome branching seed maturation 20S proteasome subunit beta 4 [EC:3.4.25.1] E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26] E3 ubiquitin-protein ligase BRE1 [EC:2.3.2.27] |
| more details in UCSC | details of chromatin state |
| Gene | Type | Chr | Start | End | Strand |
|---|---|---|---|---|---|
| MD15G1388900 | mRNA | Chr15 | 48152448 | 48159299 | + |
| CDS: |
| MD15G1388900 |
| Protein: |
| MD15G1388900 |
| Gene family | Subfamily |
|---|---|
| -- | -- |
| Species | Gene ID | Score of Inparanoid | Annotation |
|---|---|---|---|
| Solanum lycopersicum | Solyc01g006040.2.1 | 1 | histone mono-ubiquitination 2 |
| Oryza sativa | LOC_Os10g41590.1 | 1 | "zinc finger, C3HC4 type domain containing protein, expressed" |
| Zea mays | GRMZM2G341271_P01 | 1 | histone mono-ubiquitination 2 |
| GO term | Description | Category |
|---|---|---|
| -- | -- | -- |
| KO | Description | Enzyme |
|---|---|---|
| K10696 | E3 ubiquitin-protein ligase BRE1 | EC:2.3.2.27 |
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
 |