Gene detail

Detail information of MD16G1050800 Annotation

Gene ID	Annotation
MD16G1050800	EXS (ERD1/XPR1/SYG1) family protein

Network

Network Category	Global Network	Conditional network (different tissues and developmental stages)
Coexpression Positive	Top300 PCC genelist	Top300 PCC genelist
Coexpression Negative	Top300 PCC genelist	Top300 PCC genelist

Functional module

Method	Module ID	Function Annotation
--	--	--

Gene structure and chromatin state

more details in UCSC

details of chromatin state

Location

Gene	Type	Chr	Start	End	Strand
MD16G1050800	mRNA	Chr16	3627571	3632983	+

Sequences

CDS:

MD16G1050800

TTCCTTTTTTCCCAACCCCCATAAATATGTCACAAAGGGCTTCGTTAGAACACTCACAAGGAGAACTAGAGCCTCTTCATCATCCTTCTCTCTCAGAACTAGAAACTCTACGAGAAAAAATGGTGAAGTTCTCCAAGCAATTTGAAGGGCAGCTCGTCCCTGAATGGAAGGATGCATTCGTCGATTACTGGCAGCTTAAGAAGGACCTCAAAAAAATCCATCTCCTCAACTCTAACAACAACAAAAACTCACCTACTAGGCACCAAAGTAGCCCCTCTTTATCCAACACCCTCTTCACTTCTATAAGGAAGTTCTCTCCATTTGGCCATCCACATAGAGAACATGACCTCATACATGTTCACAAGAAGCTTGCCTCATCCGCAAGCAAGGAAGACATGTATGAGACTGAATTGTTAGAACAATTCGCCGATACTGATGCTGCGAAAGAGTTTTTCGCATGCCTCGACCTTCAGCTGAACAAGGTGAATCAGTTTTTCAAAACAAAGGAGAAAGAGTTCGTGGAGAGAGGGGAGTCCTTGAGGAAACAAATGGATATACTCATTGAGCTCAAAACCGCCTTCAAGAAACAGCGCGGTAAAGGAGCTTTTGCACTGAACTCCAAGGAGGATATCTCCATGTCATGCTCCTTCTCGTCTGATGAGGACTCTGTTAAGGGCAAAACAGAGCAAGAACAGCCGCAAGACAGCACAGATGACTTGGAGAAAAATGAAGCGGCATACTCGGAAGGAGGCGAATTGGGAAAATCAATGAGAACGAAAAGTGAAGATATTGGGAAGCTAAGGAGCATGTCAAGTCGTTCTTTCAGCTTCCAAGGGAAGAACTTGAAGATAAACATTCCTCTAACAAATCCATCGCGTACTTTCTCAGCGATCAGTTACGTAGTTTGGGAAGACCTGGTGAATCAGTCCTCGAGGAAATGCGGTGCAGACGGAGGTAAGCTGCACATCAACAAAACCAAGTTGCATCATGCGGACAAGATGATCCGAGGCGCTTTCGTTGAGCTCTATAAGGGGCTGGGATATCTGAAAACTTACAGGAACTTGAACATGCTTGCTTTTATAAAGATTTTAAAGAAGTTTGACAAAGTCACTGGAAAACAAGTGCTTCCAATTTACCTAAAAGTTGTGGAGAGTTCCTACTTCAACAGCTCCGATAAGGTGATGAACTTAGGAGATGAAGTTGAGGAGCTTTTCATCAAACACTTTGCCGAAGAAGACCGACGAAAGGCCATGAAATACCTTAAACCGACGCAGCGCAAAGAATCACACTCCATAACGTTCTTCATTGGTTTATTCACGGGATGCTTTATTGCGCTCTTAACCGGATACGTCGTTATGGCTCATATCACGGGATTGTACAGACGGCAGCCAAAATCGGTCTATATGGAAACTGCCTACCCTGTACTTAGCATGTTCAGCCTACTGTTTCTACACTTCTTCTTGTACGGTTGCAACATTTTCGCGTGGAGAAAGGCGCGTATAAATTACAGTTTCATCTTCGAATTGTCCCAGACGAAGGAGCTAAAGTATCGAGATGTGTTCTTGATCTGCACCATGTCGTTGACTACTGTGGTGGGAGTCATGTGTGTTCATTTGTTACTGCTAACAAAAGGCTACTCATATGCCCAAGTTCAAGCAATCCCTGGCCTTCTTTTACTGACGTTTCTCCTGTTACTTGTATGCCCCTTCAACATCATTTACCAATCAAGCCGCTTCCGCCTTCTTCGTGTGATAAGAAATATCATTCTGTCACCTCTGTACAAGGTCGTCATGCTGGACTTCTTCATGGCAGATCAACTTTGTAGTCAGGTACCGATGCTTAGGAATCTCGAGTATGTGGCATGTTACTACATAACTGGAAGCTACAAAACTCAGGACTATGGCTACTGCATGAGGGCAGGGCACTACCTAGATCTTGCTTATGCCGTGTCCTTCCTACCCTATTACTGGAGAGCAATGCAGTGCGCTCGGCGGTGGTTTGATGAGGGTCAGACAAGCCACCTGGTGAATCTAGGCAAATATGTGTCAGCAATGTTAGCAGCCGGAGCTAAAGTAGCTTATGAGAAAGAACGGAGCATCGGATGGCTCTGTCTTGTTGTGATCATGTCGACTTTTGCAACAGTTTACCAATTGTATTGGGACTTTGTAAAGGATTGGGGTTTGCTACAAATGAATTCCAAGAATCCTTTGCTTAGGAACGAATTAATGATTCGCCGAAAGTTCATATACTACATCTCAATGGGATTGAACCTTTTTCTCAGGCTAGCTTGGTTGCAAACTGTTCTCCATTCAAGTTTTGGACATGTGGACTACCGAGTAACCGGGCTGTTTTTAGCTGCTCTTGAAGTCATCAGAAGAGGGTTGTGGAATTTTTTCAGGTTGGAGAATGAGCATCTAAATAATGCAGGCAAGTTTAGAGCAGTTAAGACTGTACCACTGCCTTTTCATGAAGTGGATGAACAAGACTGATGCCCCATTGGCAACAGTTGCAGATAGAATTCGATGTTTAGGCGTTTTCGGAACAAATGTTTCCAAGAGGAAGAACCTTGTTGTTGAGAGCTCGTTCCAAAGTTGATGTAACAAGACACATCAACTTTGTCATCTCTTTTTGTTCGATCGGTGGATTTGAGGGGAACATTTGTTCATACTTACACAAAAAATTTCCTTCATCAATGAAAAGAAAAGGAAATTGATGCAAAGTGCAAATACATGTTGTATATATGCTCAACCTTTCTGTCCTTGTTCCATGGAGCAACAAATACTAAGTAAATAGGGTTTCAATAGTCAAAGTAAATCCTAATGATGTTCTTGTGTCTGCACACTTGTATAAGAT

Protein:

Gene family

Gene family	Subfamily
--	--

Orthologous genes

Species	Gene ID	Score of Inparanoid	Annotation
Arabidopsis thaliana	AT1G68740.1	1	PHO1\|EXS (ERD1/XPR1/SYG1) family protein
Prunus persica	Prupe.1G301900.1.p	1	EXS (ERD1/XPR1/SYG1) family protein
Pyrus communis	PCP032153.1	1	-
Pyrus x bretschneideri	Pbr013228.1	1	-
Rubus occidentalis	Ro04_G36202	1	-
Fragaria vesca	mrna04473.1	1	EXS (ERD1/XPR1/SYG1) family protein
Vitis vinifera	GSVIVT01012001001	1	EXS (ERD1/XPR1/SYG1) family protein
Solanum lycopersicum	Solyc05g010060.2.1	1	EXS (ERD1/XPR1/SYG1) family protein
Solanum lycopersicum	Solyc09g090360.2.1	1	phosphate 1
Populus trichocarpa	Potri.010G132300.1	1	EXS (ERD1/XPR1/SYG1) family protein
Nicotiana benthamiana	Niben101Scf00465g00003.1	1	Phosphate transporter PHO1 homolog 1
Oryza sativa	LOC_Os01g02000.1	1	"phosphate transporter 1, putative, expressed"
Oryza sativa	LOC_Os06g29790.1	1	"phosphate transporter 1, putative, expressed"
Zea mays	GRMZM2G064657_P01	1	EXS (ERD1/XPR1/SYG1) family protein

Gene Ontology

GO term	Description	Category
GO:0016021	integral component of membrane	cellular component

KEGG

KO	Description	Enzyme
--	--	--

Pfam domain

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03105.15	SPX	33	372	7.00E-59

Expression pattern

SRA Experiment	Tissue	Stress	Stage	FPKM
SRR768136	whole seedling	no	seedling	1.21924
SRR5252888	dormant buds	no	dormant buds(0 month)	0.587129
SRR5252889	dormant buds	no	dormant buds(0 month)	1.26315
SRR5252886	dormant buds	no	dormant buds(1 months)	0.710315
SRR5252887	dormant buds	no	dormant buds(1 months)	2.00055
SRR5252884	dormant buds	no	dormant buds(2 months)	0.120562
SRR5252882	dormant buds	no	dormant buds(3 months)	0.181375
SRR5252883	dormant buds	no	dormant buds(3 months)	0.658796
SRR5252880	dormant buds	no	dormant buds(4 months)	1.08608
SRR5252881	dormant buds	no	dormant buds(4 months)	0.468808
SRR5252878	bud break	no	bud break	0.480786
SRR5252879	bud break	no	bud break	0.899674
SRR3744766	flower	no	mature	0.463578
SRR3744767	flower	no	mature	0.601821
SRR3744768	flower	no	mature	0.459683
SRR6308190	stigmas	no	open flowers	0.0483971
SRR6308181	styles	no	open flowers	0.0833566
SRR6308188	filaments	no	open flowers	0
SRR6308187	anthers	no	buds 1-3 days prior to flower opening	0
SRR6308192	pollen	no	open flowers	0
SRR6308191	petals	no	open flowers	0
SRR6308194	sepals	no	open flowers	0.828822
SRR6308193	receptacles	no	open flowers	1.11556
SRR6308189	ovaries	no	open flowers	0.06719
SRR3384922	fruit	no	1 week after full bloom	0.311272
SRR3384921	fruit	no	2 week after full bloom	1.19458
SRR3384920	fruit	no	3 week after full bloom	1.37549
SRR3384919	fruit	no	4 week after full bloom	1.44517
SRR3384923	fruit	no	5 week after full bloom	4.40737
SRR3384918	fruit	no	6 week after full bloom	1.82008
SRR3384917	fruit	no	8 week after full bloom	1.25674
SRR3384916	fruit	no	10 week after full bloom	1.97892
SRR3384915	fruit	no	12 week after full bloom	3.01461
SRR3384914	fruit	no	14 week after full bloom	0.624488
SRR3384913	fruit	no	16 week after full bloom	0.234036
SRR3384912	fruit	no	18 week after full bloom	0.878523
SRR3384911	fruit	no	19 week after full bloom	0.270838
SRR3384910	fruit	no	20 week after full bloom	0.871796
SRR768128	whole fruit	no	25 days post anthesis	0.750817
SRR768129	whole fruit	no	35 days post anthesis	0.524687
SRR768130	whole fruit	no	60 days post anthesis	2.01071
SRR768131	whole fruit	no	87 days post anthesis	1.04052
SRR7343308	immature fruit flesh	no	immature	2.83974
SRR7343309	immature fruit flesh	no	immature	1.49935
SRR6320494	ripe fruit flesh	no	mature	0
SRR5405143	ripe fruit peel	no	mature	0
SRR6320572	ripe fruit peel	no	mature	0
SRR7403504	fruit	uninfected	mature	0
SRR7403506	fruit	uninfected	mature	0
SRR7403507	fruit	uninfected	mature	0
SRR7403500	fruit	infected with penicillium expansum	mature	0
SRR7403501	fruit	infected with penicillium expansum	mature	0
SRR7403508	fruit	infected with penicillium expansum	mature	0
SRR7403502	fruit	infected with penicillium expansum	mature	0
SRR7403503	fruit	infected with penicillium expansum	mature	0
SRR7403505	fruit	infected with penicillium expansum	mature	0
SRR1613973	Central seeds	no	20DAPF	0.00847377
SRR1613974	Central seeds	no	20DAPF	0.0349301
SRR1613975	Central seeds	no	20DAPF	0.0395192
SRR1613976	Lateral seeds	no	20DAPF	0
SRR1613977	Lateral seeds	no	20DAPF	0.0241178
SRR1613978	Lateral seeds	no	20DAPF	0.0147689
SRR3744786	stem	no	mature	0.683137
SRR3744787	stem	no	mature	0.484317
SRR3744772	stem	no	mature	0.648315
SRX765691	seedling shoot apex	no	4-6 week old seedling	1.2094
SRX765683	tree shoot apex	no	Adult (tree), new shoot has 10-12 visible leaves	1.34718
SRR1089478	leaf	Virus-free	plantlets	7.1503
SRR1089477	leaf	ASGV-infected	plantlets	5.25004
SRR767660	leaf	uninfected	fully developed	5.15157
SRR767669	leaf	2 days post infection by Venturia inaequalis	fully developed	0
SRR767670	leaf	4 days post infection by Venturia inaequalis	fully developed	2.41381
SRR767671	leaf	6 days post infection by Venturia inaequalis	fully developed	5.00822
SRR767672	leaf	8 days post infection by Venturia inaequalis	fully developed	12.5245
SRR767673	leaf	10 days post infection by Venturia inaequalis	fully developed	2.23977
SRR767674	leaf	12 days post infection by Venturia inaequalis	fully developed	1.6822
SRR768127	leaf	14 days post infection by Venturia inaequalis	fully developed	0.282467
SRR6308182	young leaf	no	immature leaves	0.867746
SRR3744769	leaf	no	mature	0.197926
SRR3744770	leaf	no	mature	0.470513
SRR3744771	leaf	no	mature	0.489956
SRR5405145	leaf	no	mature	1.93947
SRR6320561	leaf	no	mature	1.50638